Pinned repositories

  1. helpdesk

    The Gene Ontology Helpdesk

    1 2

  2. go-ontology

    Source ontology files for the Gene Ontology

    Shell 32 16

  3. go-annotation

    This repository hosts the tracker for issues pertaining to GO annotations.

    9 2

  4. noctua

    Graph-based modeling environment for biology, including prototype editor and services

    JavaScript 15 11

  5. amigo

    AmiGO is the public interface for the Gene Ontology.

    JavaScript 11 8

  6. go-site

    A collection of metadata, tools, and files associated with the Gene Ontology public web presence.

    Perl 6 68

  • This is the data repository for the models created and edited with the Noctua tool stack for GO.

    Makefile 3 4 CC-BY-4.0 1 issue needs help Updated Aug 18, 2018
  • Source ontology files for the Gene Ontology

    Shell 32 16 Updated Aug 17, 2018
  • A collection of metadata, tools, and files associated with the Gene Ontology public web presence.

    Perl 6 68 BSD-3-Clause Updated Aug 15, 2018
  • Declarative pipeline for the Gene Ontology.

    BSD-3-Clause Updated Aug 15, 2018
  • Python 1 Updated Aug 13, 2018
  • Graph-based modeling environment for biology, including prototype editor and services

    JavaScript 15 11 BSD-3-Clause Updated Aug 13, 2018
  • AmiGO is the public interface for the Gene Ontology.

    JavaScript 11 8 BSD-3-Clause Updated Aug 10, 2018
  • Short form matrix view of all GO annotations for a given gene

    JavaScript 4 BSD-3-Clause Updated Aug 8, 2018
  • Java 1 4 BSD-3-Clause 1 issue needs help Updated Aug 3, 2018
  • Code for converting between BioPAX pathways and Gene Ontology Causal Activity Models (GO-CAM)

    Java Updated Aug 3, 2018
  • Updated Aug 2, 2018
  • GO-CAMs site as an Angular 2+ Application

    TypeScript 1 BSD-3-Clause 1 issue needs help Updated Aug 2, 2018
  • Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.

    2 Updated Aug 1, 2018
  • GitHub repository for the NodeJS/Express REST web service go-api-sparql. Used for the front-end www.geneontology.org/gocam.

    JavaScript 1 BSD-3-Clause Updated Jul 27, 2018
  • Javascript Library to translate CURIEs to IRIs and vice versa

    JavaScript 2 BSD-3-Clause Updated Jul 25, 2018
  • Gene Ontology API deployment

    2 1 Updated Jul 23, 2018
  • Repository for storing GO documentations, directly available through the general GO site (WIP)

    Updated Jul 20, 2018
  • Tools and data for intersections/co-annotation checks in the Gene Ontology.

    JavaScript BSD-3-Clause Updated Jul 13, 2018
  • noctua entity ontology

    Perl 1 Updated Jul 9, 2018
  • Basic and Advanced OBO Graphs: specification and reference implementation

    Java 17 8 Updated May 23, 2018
  • Home for GO SPARQL queries, templates, et al

    1 Updated May 12, 2018
  • Simple annoton editor workbench for Noctua.

    HTML 1 2 BSD-3-Clause Updated May 12, 2018
  • scala app for converting SynGO JSON to OWL (ttl) for loading into noctua

    Scala 1 Updated Apr 20, 2018
  • A repo for conversion of syngo JSON to GO-CAM OWL

    Python Updated Mar 17, 2018
  • This repository hosts the tracker for issues pertaining to GO annotations.

    9 2 Updated Mar 10, 2018
  • geneontology.github.io webpages.

    HTML CC0-1.0 Updated Jan 24, 2018
  • Jupyter notebooks for GO

    Jupyter Notebook Updated Jan 3, 2018
  • Sparql queries that validate

    Updated Oct 2, 2017
  • A repository for the development of patterns and terms for axiomatisation and refactoring of the GO MF branch

    Web Ontology Language 1 Updated Sep 30, 2017
  • Material for GO OWL/Protege Tutorial

    Web Ontology Language 11 8 Updated Sep 18, 2017