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API for linked biological knowledge
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README.md

Gene Ontology API

The Gene Ontology API instance is accessible here:

https://api.geneontology.org/api/

Is is an implementation of both the BioLink Model and BioLink Implementation which rely on Ontobio

Running the server

After checking out this repo:

./start-server.sh

This uses gunicorn and starts a server on 8888 by default. pyvenv is activated automatically.

Then look at:

http://localhost:8888/api/

For the swagger docs

To run in development mode:

pyvenv venv
source venv/bin/activate
pip install -r requirements.txt
export PYTHONPATH=.:$PYTHONPATH
python biolink/app.py
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