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CLUSTER data with Conos

Contact: Edwin Juárez, Anthony Castanza

This is step 2 of 3 in the Conos pipeline. This module will read single cell data (e.g., count files) from different datasets and project each of those datasets into their own PCA space.

[Documentation incomplete]

More details in the original package:

The module ends by saving some variables to file:

# Save an object to a file
saveRDS(list(con=con,runleiden=runleiden,runwalktrap=runwalktrap), "conos_cluster_output.rds")
print('saved conos_cluster_output.rds')

Technical note:

This module uses the Conos Docker container vpetukhov/conos:version-1.1.1