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Pre-release
Pre-release

@peterjcarr peterjcarr released this Jan 15, 2019 · 64 commits to develop since this release

Prerequisites

  • Java 1.8 or higher
  • Docker

Mac OS X Install

Download the 'GenePattern-3.9.11-b208.app.zip' file. Unzip and launch the application. You will be prompted to enter some basic configuration details. Restart and you are up and running. The user data and customization files will be added to the '~/.genepattern' hidden folder in your home directory.

Linux Install

Download the 'GenePattern-3.9.11-b208.bin' file. Then run the installer in headless mode.

step 1: create an installer.properties file

Example, /opt/genepattern/installer.properties

USER_INSTALL_DIR=/opt/genepattern/gp

INSTALLER_UI=silent
INSTALLER_TEMP_DIR=/tmp
IATEMPDIR=/tmp

step 2: run the installer

Example,

cd  /opt/genepattern
chmod u+x GPserver.bin
./GPserver.bin -f installer.properties
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