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Branch: master
Commits on Dec 5, 2018
Commits on Nov 20, 2018
  1. README: info on permutations

    pjotrp committed Nov 20, 2018
  2. README: documentation on permutations added

    pjotrp committed Nov 20, 2018
    VERSION: bump
  3. Fixed two bugs:

    pjotrp committed Nov 20, 2018
    - gemma-wrapper bailed out when a phenotype was provided for a normal GWA run
    - handling of --permute-phenotype switch
Commits on Nov 19, 2018
  1. README: Update badge

    pjotrp committed Nov 19, 2018
  2. Add test phenotype file

    pjotrp committed Nov 19, 2018
  3. Updated gemma-wrapper to ignore including the phenotype file in the h…

    pjotrp committed Nov 19, 2018
    …ash that
    
    is used for caching. This no longer triggers a recompute of K with different
    phenotype files. K is now always computed on the full genotypes.
    
    This is related to genetics-statistics/GEMMA#155
Commits on Jul 19, 2018
  1. Bump version

    pjotrp committed Jul 19, 2018
  2. Minor layout

    pjotrp committed Jul 19, 2018
Commits on May 2, 2018
  1. Output

    pjotrp committed May 2, 2018
  2. Add 67 percentile

    pjotrp committed May 2, 2018
Commits on May 1, 2018
  1. Adding permutations

    pjotrp committed May 1, 2018
  2. Preparing to run permutations

    pjotrp committed May 1, 2018
  3. Preparing to run permutations

    pjotrp committed May 1, 2018
  4. Fix filenames for non-LOCO K

    pjotrp committed May 1, 2018
Commits on Feb 10, 2018
Commits on Sep 3, 2017
  1. Check test outcomes

    pjotrp committed Sep 3, 2017
  2. Adding tests

    pjotrp committed Sep 3, 2017
  3. Usage info

    pjotrp committed Sep 3, 2017
Commits on Aug 30, 2017
  1. gemma: more version checks

    pjotrp committed Aug 30, 2017
  2. gemma: check version

    pjotrp committed Aug 30, 2017
Commits on Aug 29, 2017
  1. Gemspec

    pjotrp committed Aug 29, 2017
  2. Rename to gemma-wrapper

    pjotrp committed Aug 29, 2017
  3. GWA LOCO also gets cached now

    pjotrp committed Aug 29, 2017
  4. Running a LOCO

    pjotrp committed Aug 29, 2017
  5. K: LOCO loop

    pjotrp committed Aug 29, 2017
Commits on Aug 28, 2017
  1. Preparing for LOCO

    pjotrp committed Aug 28, 2017
  2. Options: explain --

    pjotrp committed Aug 28, 2017
  3. JSON: more handling

    pjotrp committed Aug 28, 2017
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