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MGI's Analysis Workflows and Pipelines managed by the BGA group.
Supplementary data for scRNA mutation publication
Core modules used by the GMS
Docker containerization for the CLE
Repo for cle related software
Commands and Modules used by the Reference Improvement group.
Website for Variant Interpretation for Cancer Consortium:
a fat pipeline for running WGBS analysis
CLI to Manage and Store 10X Genomics Objects
Docker container for Samtools
Create JIRA issues when keywords are matched in RSS feeds.
Rich Transactional Objects for Perl
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.
Docker image for https://github.com/Oshlack/STRetch
Docker image for running https://github.com/Illumina/ExpansionHunter