From dea4199722053a179bc64919e81ee43d61bf2aa8 Mon Sep 17 00:00:00 2001 From: Dave Larson Date: Sat, 3 Sep 2016 18:50:12 -0500 Subject: [PATCH] fix test data --- test-data/expected_all_lib | 2 +- test-data/expected_insertion_centric_all_lib | 2 +- test-data/expected_insertion_centric_per_lib | 2 +- test-data/expected_per_lib | 2 +- 4 files changed, 4 insertions(+), 4 deletions(-) diff --git a/test-data/expected_all_lib b/test-data/expected_all_lib index 16246bc..8485b3d 100644 --- a/test-data/expected_all_lib +++ b/test-data/expected_all_lib @@ -1,2 +1,2 @@ -21 10402985 G 344 =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:3:58.33:11.33:0.00:2:1:0.49:0.05:43.67:2:0.51:237.67:0.54 C:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 G:341:52.80:26.00:0.16:189:152:0.50:0.01:11.75:295:0.39:237.76:0.39 T:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 +A:20:52.55:0.00:0.00:12:8:0.53:0.02:25.00:18:0.41:237.70:0.39 +21 10402985 G 344 =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:3:58.33:11.33:0.00:2:1:0.48:0.05:43.67:2:0.51:237.67:0.54 C:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 G:341:52.80:26.00:0.16:189:152:0.50:0.01:11.75:295:0.39:237.76:0.39 T:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 +A:20:52.55:0.00:0.00:12:8:0.53:0.02:25.00:18:0.41:237.70:0.39 21 10405200 T 59 =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:30:46.53:25.17:0.23:17:13:0.20:0.01:33.57:26:0.34:246.07:0.42 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:29:58.00:25.14:0.00:18:11:0.19:0.01:17.69:27:0.26:244.66:0.30 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 diff --git a/test-data/expected_insertion_centric_all_lib b/test-data/expected_insertion_centric_all_lib index 0167a53..15b8995 100644 --- a/test-data/expected_insertion_centric_all_lib +++ b/test-data/expected_insertion_centric_all_lib @@ -1,2 +1,2 @@ -21 10402985 G 344 =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:3:58.33:11.33:0.00:2:1:0.49:0.05:43.67:2:0.51:237.67:0.54 C:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 G:321:52.82:25.94:0.17:177:144:0.50:0.01:10.92:277:0.39:237.77:0.39 T:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 +A:20:52.55:0.00:0.00:12:8:0.53:0.02:25.00:18:0.41:237.70:0.39 +21 10402985 G 344 =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:3:58.33:11.33:0.00:2:1:0.48:0.05:43.67:2:0.51:237.67:0.54 C:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 G:321:52.82:25.94:0.17:177:144:0.50:0.01:10.92:277:0.39:237.77:0.39 T:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 +A:20:52.55:0.00:0.00:12:8:0.53:0.02:25.00:18:0.41:237.70:0.39 21 10405200 T 59 =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:30:46.53:25.17:0.23:17:13:0.20:0.01:33.57:26:0.34:246.07:0.42 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:29:58.00:25.14:0.00:18:11:0.19:0.01:17.69:27:0.26:244.66:0.30 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 diff --git a/test-data/expected_insertion_centric_per_lib b/test-data/expected_insertion_centric_per_lib index 8927575..098ecdf 100644 --- a/test-data/expected_insertion_centric_per_lib +++ b/test-data/expected_insertion_centric_per_lib @@ -1,2 +1,2 @@ 21 10402985 G 344 Solexa-135852 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:2:57.50:16.00:0.00:2:0:0.35:0.02:42.50:2:0.51:231.50:0.51 C:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 G:135:53.77:25.41:0.00:78:57:0.51:0.01:9.04:116:0.38:236.42:0.38 T:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 +A:20:52.55:0.00:0.00:12:8:0.53:0.02:25.00:18:0.41:237.70:0.39 } Solexa-135853 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:1:60.00:2.00:0.00:0:1:0.76:0.10:46.00:0:0.00:250.00:0.62 C:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 G:186:52.12:26.33:0.29:99:87:0.50:0.01:12.29:161:0.39:238.74:0.40 T:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 } -21 10405200 T 59 Solexa-135852 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:8:42.88:26.50:0.88:3:5:0.15:0.01:35.75:5:0.49:247.38:0.66 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:14:57.93:23.36:0.00:9:5:0.19:0.01:26.64:14:0.29:245.86:0.29 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 } Solexa-135853 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:22:47.86:24.68:0.00:14:8:0.22:0.01:32.77:21:0.30:245.59:0.33 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:15:58.07:26.80:0.00:9:6:0.19:0.01:9.33:13:0.23:243.53:0.31 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 } +21 10405200 T 59 Solexa-135852 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:8:42.88:26.50:0.88:3:5:0.14:0.01:35.75:5:0.49:247.38:0.66 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:14:57.93:23.36:0.00:9:5:0.19:0.01:26.64:14:0.29:245.86:0.29 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 } Solexa-135853 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:22:47.86:24.68:0.00:14:8:0.22:0.01:32.77:21:0.30:245.59:0.33 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:15:58.07:26.80:0.00:9:6:0.19:0.01:9.33:13:0.23:243.53:0.31 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 } diff --git a/test-data/expected_per_lib b/test-data/expected_per_lib index 905eba8..8fbe216 100644 --- a/test-data/expected_per_lib +++ b/test-data/expected_per_lib @@ -1,2 +1,2 @@ 21 10402985 G 344 Solexa-135852 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:2:57.50:16.00:0.00:2:0:0.35:0.02:42.50:2:0.51:231.50:0.51 C:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 G:155:53.61:25.61:0.00:90:65:0.51:0.01:11.10:134:0.39:236.59:0.38 T:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 +A:20:52.55:0.00:0.00:12:8:0.53:0.02:25.00:18:0.41:237.70:0.39 } Solexa-135853 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:1:60.00:2.00:0.00:0:1:0.76:0.10:46.00:0:0.00:250.00:0.62 C:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 G:186:52.12:26.33:0.29:99:87:0.50:0.01:12.29:161:0.39:238.74:0.40 T:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 } -21 10405200 T 59 Solexa-135852 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:8:42.88:26.50:0.88:3:5:0.15:0.01:35.75:5:0.49:247.38:0.66 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:14:57.93:23.36:0.00:9:5:0.19:0.01:26.64:14:0.29:245.86:0.29 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 } Solexa-135853 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:22:47.86:24.68:0.00:14:8:0.22:0.01:32.77:21:0.30:245.59:0.33 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:15:58.07:26.80:0.00:9:6:0.19:0.01:9.33:13:0.23:243.53:0.31 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 } +21 10405200 T 59 Solexa-135852 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:8:42.88:26.50:0.88:3:5:0.14:0.01:35.75:5:0.49:247.38:0.66 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:14:57.93:23.36:0.00:9:5:0.19:0.01:26.64:14:0.29:245.86:0.29 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 } Solexa-135853 { =:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 A:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 C:22:47.86:24.68:0.00:14:8:0.22:0.01:32.77:21:0.30:245.59:0.33 G:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 T:15:58.07:26.80:0.00:9:6:0.19:0.01:9.33:13:0.23:243.53:0.31 N:0:0.00:0.00:0.00:0:0:0.00:0.00:0.00:0:0.00:0.00:0.00 }