Genouest BioInformatics Platform

Docker build for BioMAJ

account manager for core facility

Openstack VM expiration service

BioMAJ

Blast web interface based on symfony2

Galaxy tools developed by the GenOuest core facility

Sample community db properties and postprocesses

Core library used by biomaj components

BioMAJ post processes to manipulate Galaxy tool data tables

Logol is a biological pattern matching tool against DNA or protein sequences. It matches a grammar written in LOGOL language againts one or several sequences to find patterns.

FTP server to access BioMAJ banks repository

Download microservice for BioMAJ

An IUC-like repo for training

Conda repository for training

Prometheus exporter for openstack core services

openstack client plugin for os-vm-expire

Horizon plugin for os-vm-expire

micro service to manage biomaj client requests and bank updates

cron management service for BioMAJ

CLI for BioMAJ

Web proxy to biomaj micro services

Process microservice for BioMAJ

Hadoopizer is a generic tool for the parallelisation of bioinformatics analysis in the cloud using the MapReduce paradigm.

Web interface for Biomaj management

Biomaj service to watch remote banks release and send prometheus stats

User management library and service for BioMAJ

This bundle allows you to launch jobs on a cluster from a symfony application.

zipkin integration for BioMAJ to log microservice flow

Migration script from old biomaj v1 to to new release v3

Web site for biomaj