Download microservice for BioMAJ
FTP server to access BioMAJ banks repository
Process microservice for BioMAJ
micro service to manage biomaj client requests and bank updates
Biomaj service to watch remote banks release and send prometheus stats
User management library and service for BioMAJ
Web interface for Biomaj management
Docker build for BioMAJ
Blast web interface based on symfony2
This bundle allows you to launch jobs on a cluster from a symfony application.
CLI for BioMAJ
Web proxy to biomaj micro services
Core library used by biomaj components
zipkin integration for BioMAJ to log microservice flow
cron management service for BioMAJ
Logol is a biological pattern matching tool against DNA or protein sequences. It matches a grammar written in LOGOL language againts one or several sequences to find patterns.
BioMAJ post processes to manipulate Galaxy tool data tables
This repository contains the colibread Galaxy repositories
Sample community db properties and postprocesses
Galaxy tools developed by the GenOuest core facility
Migration script from old biomaj v1 to to new release v3
Web site for biomaj
XGrid is an internal tool developed to ease the deployment of tools in the cloud. It is used to setup Hadoop, SGE or manband workflows environments and to use the CHEF cookbooks installation plugin.
Docker file to build container for /softs usage
This bundle allows you to use the BioMAJ REST API from a Symfony application.
Symfony2 bundle containing some utilties to manipulate bioinformatics data.
Hadoopizer is a generic tool for the parallelisation of bioinformatics analysis in the cloud using the MapReduce paradigm.