NullPointerException when importing from database #691

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kaupo-parmas opened this Issue Nov 14, 2012 · 0 comments

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@kaupo-parmas

This happened when i was loading a graph from mysql that has slightly over 200K nodes and 3.5M edges.

Log from gephi

Log Session: Sunday, November 11, 2012 8:29:24 PM CET
System Info:
Product Version = Gephi 0.8.1 beta 201202141941
Operating System = Windows 7 version 6.1 running on amd64
Java; VM; Vendor = 1.7.0; Java HotSpot(TM) 64-Bit Server VM 21.0-b17; Oracle Corporation
Runtime = Java(TM) SE Runtime Environment 1.7.0-b147
Java Home = C:\Program Files\Java\jdk1.7.0\jre
System Locale; Encoding = en_US (gephi); Cp1252
Home Directory = C:\Users\Kaupo
Current Directory = C:\Program Files (x86)\Gephi
User Directory = C:\Users\Kaupo\AppData\Roaming.gephi\0.8.1\dev
Cache Directory = C:\Users\Kaupo\AppData\Roaming.gephi\0.8.1\dev\var\cache
Installation = C:\Program Files (x86)\Gephi\gephi
C:\Program Files (x86)\Gephi\platform
Boot & Ext. Classpath = C:\Program Files\Java\jdk1.7.0\jre\lib\resources.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\rt.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\sunrsasign.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\jsse.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\jce.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\charsets.jar;C:\Program Files\Java\jdk1.7.0\jre\classes;C:\Program Files\Java\jdk1.7.0\jre\lib\ext\dnsns.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\ext\localedata.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\ext\sunec.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\ext\sunjce_provider.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\ext\sunmscapi.jar;C:\Program Files\Java\jdk1.7.0\jre\lib\ext\zipfs.jar
Application Classpath = C:\Program Files (x86)\Gephi\platform\lib\boot.jar;C:\Program Files (x86)\Gephi\platform\lib\org-openide-modules.jar;C:\Program Files (x86)\Gephi\platform\lib\org-openide-util-lookup.jar;C:\Program Files (x86)\Gephi\platform\lib\org-openide-util.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_ar_SA.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_bg.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_ca.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_cs.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_de.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_es.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_fr.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_gl_ES.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_in_ID.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_it.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_ja.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_ko.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_nl_NL.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_pl.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_pt_BR.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_pt_PT.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_ro.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_ru.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_si.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_sq.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_sv.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_tr.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_zh_CN.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\boot_zh_TW.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_ar_SA.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_bg.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_ca.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_cs.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_de.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_es.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_fr.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_gl_ES.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_in_ID.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_it.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_ja.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_ko.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_nl_NL.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_pl.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_pt_BR.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_pt_PT.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_ro.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_ru.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_si.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_sq.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_sv.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_tr.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_zh_CN.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-modules_zh_TW.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_bg.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_ca.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_cs.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_de.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_es.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_fr.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_gl_ES.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_in_ID.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_it.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_ja.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_ko.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_nl_NL.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_pl.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_pt_BR.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_ro.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_ru.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_si.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_sv.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_tr.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util-lookup_zh_CN.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_ar_SA.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_bg.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_ca.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_cs.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_de.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_es.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_fr.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_gl_ES.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_in_ID.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_it.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_ja.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_ko.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_nl_NL.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_pl.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_pt_BR.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_pt_PT.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_ro.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_ru.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_si.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_sq.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_sv.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_tr.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_zh_CN.jar;C:\Program Files (x86)\Gephi\platform\lib\locale\org-openide-util_zh_TW.jar;C:\Program Files\Java\jdk1.7.0\lib\dt.jar;C:\Program Files\Java\jdk1.7.0\lib\tools.jar

Startup Classpath = C:\Program Files (x86)\Gephi\platform\core\core.jar;C:\Program Files (x86)\Gephi\platform\core\org-openide-filesystems.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_ar_SA.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_bg.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_ca.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_cs.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_de.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_es.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_fr.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_gl_ES.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_in_ID.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_it.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_ja.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_ko.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_nl_NL.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_pl.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_pt_BR.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_pt_PT.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_ro.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_ru.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_si.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_sq.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_sv.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_tr.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_zh_CN.jar;C:\Program Files (x86)\Gephi\platform\core\locale\core_zh_TW.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_ar_SA.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_bg.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_ca.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_cs.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_de.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_es.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_fr.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_gl_ES.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_in_ID.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_it.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_ja.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_ko.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_nl_NL.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_pl.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_pt_BR.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_pt_PT.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_ro.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_ru.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_si.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_sq.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_sv.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_tr.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_zh_CN.jar;C:\Program Files (x86)\Gephi\platform\core\locale\org-openide-filesystems_zh_TW.jar;C:\Program Files (x86)\Gephi\gephi\core\locale\core_gephi.jar

INFO [org.netbeans.core.startup.NbEvents]: Turning on modules:
org.openide.util.lookup [8.11.1 201202141941]
org.openide.util [8.19.1 201202141941]
org.openide.modules [7.27.1 201202141941]
org.openide.filesystems [7.53.2 201202141941]
org.openide.awt [7.39.1 201202141941]
org.netbeans.api.progress/1 [1.26.1 201202141941]
org.openide.dialogs [7.23.1 201202141941]
org.openide.nodes [7.25.1 201202141941]
org.openide.windows [6.48.2 201202141941]
org.netbeans.modules.editor.mimelookup/1 [1.24.1 201202141941]
org.openide.text [6.43.2 201202141941]
org.netbeans.swing.tabcontrol [1.29.1 201202141941]
org.netbeans.swing.outline [1.17.2 201202141941]
org.openide.explorer [6.40.1 201202141941]
org.openide.actions [6.24.1 201202141941]
org.netbeans.modules.queries/1 [1.25.1 201202141941]
org.netbeans.api.annotations.common/1 [1.11.1 201202141941]
org.openide.loaders [7.32.1 201202141941]
org.openide.io [1.29.1 201202141941]
org.netbeans.swing.plaf [1.23.1 201202141941]
org.netbeans.swing.dirchooser [1.1 120319]
org.netbeans.spi.quicksearch [1.12.1 201202141941]
org.netbeans.bootstrap/1 [2.44.3 201202141941]
org.netbeans.core.startup/1 [1.36.1 201202141941]
org.netbeans.modules.settings/1 [1.33.1 201202141941]
org.netbeans.modules.sendopts/2 [2.15.1 201202141941]
org.netbeans.modules.progress.ui [1.18.1 201202141941]
org.netbeans.modules.print [7.11.1 201202141941]
org.netbeans.modules.keyring [1.8.1.1 201202141941]
org.netbeans.core/2 [3.28.1 201202141941]
org.netbeans.modules.options.api/1 [1.24.1 201202141941]
org.netbeans.modules.options.keymap [1.16.1 201202141941]
org.netbeans.libs.jna/1 [1.16.1 201202141941]
org.netbeans.modules.masterfs/2 [2.34.2 201202141941]
org.netbeans.modules.keyring.impl [1.5.2 201202141941]
org.netbeans.modules.favorites/1 [1.27.1 201202141941]
org.netbeans.modules.editor.mimelookup.impl/1 [1.16.1 201202141941]
org.netbeans.modules.autoupdate.services [1.28.2 201202141941]
org.netbeans.modules.autoupdate.ui [1.25.1 201202141941]
org.netbeans.libs.junit4 [1.14 201202141941]
org.netbeans.core.windows/2 [2.41.2 201202141941]
org.netbeans.core.ui/1 [1.29.1 201202141941]
org.netbeans.core.nativeaccess/1 [1.14.1 201202141941]
org.netbeans.core.io.ui/1 [1.14.1 201202141941]
org.joda.time [1.0 120319]
org.jfree [1.0 120319]
org.jdesktop.swingx [1.6.1 120319]
org.gephi.utils.longtask [0.8.0.2 120319]
org.gephi.project.api [0.8.1.1 120708]
org.gephi.graph.api [0.8.0.3 120319]
org.gephi.data.attributes.api [0.8.0.7 120708]
org.gephi.lib.javacsv [2.0 120319]
org.gephi.dynamic.api [0.8.0.7 120708]
org.gephi.utils [0.8.0.3 120319]
org.gephi.datalab.api [0.8.0.10 120319]
org.gephi.visualization.api [0.8.0.1 120319]
org.gephi.tools.api [0.8.0.1 120319]
org.gephi.lib.validation [0.4 120319]
org.gephi.ui.utils [0.8 120319]
org.gephi.lib.gleem [1.0 120319]
org.gephi.utils.collection [0.8.0.1 120319]
org.gephi.lib.commonscompress [1.1 120319]
org.gephi.io.database.drivers [0.8.0.3 120319]
org.gephi.io.importer.api [0.8.0.8 120708]
org.gephi.desktop.mrufiles.api [0.8 120319]
org.gephi.desktop.project [0.8.0.1 120328]
org.gephi.lib.jogl [1.1.0.3 120319]
org.gephi.lib.flamingo [5.0.1 120319]
org.gephi.lib.commons.codec [1.4 120319]
org.gephi.ui.components [0.8.0.7 120708]
org.gephi.visualization [0.8.1.1 120708]
org.gephi.ui.workspace [0.8.1.0 120319]
org.gephi.ui.upgrader [0.8 120319]
org.gephi.statistics.api [0.8.1.1 120319]
org.gephi.statistics.plugin [0.8.0.8 120708]
org.gephi.ui.statistics.plugin [0.8.0.4 120328]
org.gephi.lib.jcalendar [1.0 120319]
org.gephi.lib.javamail [1.0 120319]
org.gephi.io.spigot.plugin [0.8.0.1 120328]
org.gephi.ui.spigot.plugin [0.8 120328]
org.gephi.ranking.api [0.8.1.4 120328]
org.gephi.ranking.plugin [0.8.1.3 120328]
org.gephi.ui.ranking.plugin [0.8.1.2 120328]
org.gephi.ui.propertyeditor [0.8.1 120319]
org.gephi.ui.project [0.8 120319]
org.gephi.lib.beansbinding [1.2.1 120319]
org.gephi.io.processor.plugin [0.8 120328]
org.gephi.ui.processor.plugin [0.8 120328]
org.gephi.partition.api [0.8.0.1 120708]
org.gephi.partition.plugin [0.8 120319]
org.gephi.ui.partition.plugin [0.8 120319]
org.gephi.io.importer.plugin [0.8.0.8 120708]
org.gephi.ui.importer.plugin [0.8.0.2 120328]
org.gephi.io.generator.api [0.8 120328]
org.gephi.io.generator.plugin [0.8.0.1 120328]
org.gephi.ui.generator.plugin [0.8 120328]
org.gephi.timeline [0.8.1.4 120708]
org.gephi.filters.api [0.8.0.5 120328]
org.gephi.filters.plugin [0.8.0.8 120708]
org.gephi.perspective.api [0.8.2 120708]
org.gephi.desktop.perspective [0.8.2.1 120319]
org.gephi.ui.filters.plugin [0.8.0.6 120328]
org.gephi.lib.itext [5.0.1 120319]
org.gephi.io.exporter.api [0.8.1.0 120708]
org.gephi.lib.batik [1.7 120319]
org.gephi.lib.processing [1.5.1 120319]
org.gephi.preview.api [0.8.1.13 120708]
org.gephi.io.exporter.preview [0.8.1.0 120708]
org.gephi.ui.exporter.preview [0.8.0.1 120328]
org.gephi.lib.staxutils [1.0 120319]
org.gephi.io.exporter.plugin [0.8.0.8 120708]
org.gephi.ui.exporter.plugin [0.8.0.5 120319]
org.gephi.lib.timing [1.1 120319]
org.gephi.ui.components.SplineEditor [0.8.0.1 120328]
org.gephi.algorithms [0.8.1.1 120708]
org.gephi.tools.plugin [0.8.0.7 120708]
org.gephi.preview.plugin [0.8.1.6 120328]
org.gephi.layout.api [0.8.0.1 120319]
org.gephi.layout.plugin [0.8.0.3 120319]
org.gephi.plugins.layout.noverlap [1.3 110422]
org.gephi.parallelForceAtlas [0.2 110724]
org.gephi.layout.plugin.openord [0.4 110223]
org.gephi.graph.dhns [0.8.0.5 120319]
org.gephi.filters [0.8.0.5 120328]
org.gephi.dynamic [0.8.0.6 120708]
org.gephi.desktop.welcome [0.8.0.4 120708]
org.gephi.desktop.tools [0.8.0.3 120328]
org.gephi.desktop.timeline [0.8.1.4 120708]
org.gephi.desktop.statistics [0.8.1.2 120319]
org.gephi.desktop.spigot [0.8 120328]
org.gephi.desktop.recentfiles [1.0.1 120328]
org.gephi.desktop.ranking [0.8.1.6 120708]
org.gephi.desktop.progress [0.8.0.4 120319]
org.gephi.desktop.io.export [0.8.0.1 120319]
org.gephi.desktop.preview [0.8.1.9 120708]
org.gephi.desktop.partition [0.8 120319]
org.gephi.desktop.layout [0.8.0.5 120319]
org.gephi.desktop.importer [0.8.0.4 120708]
org.gephi.desktop.hierarchy [0.8.0.1 120328]
org.gephi.desktop.generate [0.8 120328]
org.gephi.desktop.filters [0.8.0.2 120328]
org.gephi.desktop.datalab [0.8.1.2 120708]
org.gephi.desktop.context [0.8.0.1 120319]
org.gephi.clustering.api [0.8 120319]
org.gephi.desktop.clustering [0.8.0.1 120328]
org.gephi.datalab.plugin [0.8.1.0 120708]
org.gephi.data.attributes [0.8.0.3 120319]
org.gephi.clustering.plugin [0.8 120319]
org.gephi.branding.desktop [0.8.1.0 120708]
cz.cvut.fit.gephi.snametrics [0.1.3 111119]
Loading native libraries
org.netbeans.core.windows.view.ui.MainWindow$4[null.nbGlassPane,0,0,0x0,invalid,hidden,layout=java.awt.FlowLayout,alignmentX=0.0,alignmentY=0.0,border=,flags=16777217,maximumSize=,minimumSize=,preferredSize=]
WARNING [org.netbeans.TopSecurityManager]: use of system property netbeans.user has been obsoleted in favor of InstalledFileLocator at org.gephi.ui.upgrader.Upgrader.getCurrentVersion(Upgrader.java:123)
Current Version is 081
GL_VENDOR: NVIDIA Corporation
GL_RENDERER: GeForce GTX 660/PCIe/SSE2
GL_VERSION: 4.2.0
Diagnostic information
Input arguments:
-Xms1048m
-Xmx10480m
-Dsun.java2d.noddraw=true
-Dsun.awt.noerasebackground=true
-Dnetbeans.indexing.noFileRefresh=true
-Dnetbeans.user.dir=C:\Program Files (x86)\Gephi\bin
-Djdk.home=C:\Program Files\Java\jdk1.7.0
-Dnetbeans.home=C:\Program Files (x86)\Gephi\platform
-Dnetbeans.user=C:\Users\Kaupo\AppData\Roaming.gephi\0.8.1\dev
-XX:+HeapDumpOnOutOfMemoryError
-XX:HeapDumpPath=C:\Users\Kaupo\AppData\Roaming.gephi\0.8.1\dev\var\log\heapdump.hprof
-Dnetbeans.system_http_proxy=DIRECT
-Dsun.awt.keepWorkingSetOnMinimize=true
-Dnetbeans.dirs=C:\Program Files (x86)\Gephi\gephi
Compiler: HotSpot 64-Bit Tiered Compilers
Heap memory usage: initial 1048,0MB maximum 9315,6MB
Non heap memory usage: initial 23,2MB maximum 130,0MB
Garbage collector: PS Scavenge (Collections=0 Total time spent=0s)
Garbage collector: PS MarkSweep (Collections=0 Total time spent=0s)
Classes: loaded=5985 total loaded=5985 unloaded 0
INFO [org.netbeans.core.ui.warmup.DiagnosticTask]: Total memory 17 153 740 800
INFO [null]: Total physical memory 17 153 740 800
WARNING [org.netbeans.modules.autoupdate.updateproviders.AutoupdateCatalogFactory]: Services/AutoupdateType/org_gephi_branding_desktop_update_center.instance: url_key attribute deprecated in favor of url
WARNING [org.netbeans.modules.autoupdate.updateproviders.AutoupdateCatalogFactory]: Services/AutoupdateType/org_gephi_branding_desktop_update_center_1.instance: url_key attribute deprecated in favor of url
Database connection terminated
java.lang.RuntimeException: java.lang.RuntimeException: java.lang.NullPointerException
at org.gephi.desktop.importer.DesktopImportControllerUI$9.run(DesktopImportControllerUI.java:375)
at org.gephi.utils.longtask.api.LongTaskExecutor$RunningLongTask.run(LongTaskExecutor.java:251)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
at java.util.concurrent.FutureTask.run(FutureTask.java:166)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
at java.lang.Thread.run(Thread.java:722)
Caused by: java.lang.RuntimeException: java.lang.NullPointerException
at org.gephi.io.importer.plugin.database.ImporterEdgeList.execute(ImporterEdgeList.java:92)
at org.gephi.io.importer.impl.ImportControllerImpl.importDatabase(ImportControllerImpl.java:214)
at org.gephi.desktop.importer.DesktopImportControllerUI$9.run(DesktopImportControllerUI.java:369)
... 7 more
Caused by: java.lang.NullPointerException
at org.gephi.io.importer.impl.ImportContainerImpl.getNode(ImportContainerImpl.java:166)
at org.gephi.io.importer.impl.ImportContainerImpl.getNode(ImportContainerImpl.java:80)
at org.gephi.io.importer.plugin.database.ImporterEdgeList.injectEdgeProperty(ImporterEdgeList.java:395)
at org.gephi.io.importer.plugin.database.ImporterEdgeList.getEdges(ImporterEdgeList.java:206)
at org.gephi.io.importer.plugin.database.ImporterEdgeList.importData(ImporterEdgeList.java:130)
at org.gephi.io.importer.plugin.database.ImporterEdgeList.execute(ImporterEdgeList.java:89)
... 9 more
INFO [org.netbeans.core.ui.focus]: External Changes Refresh on focus gain disabled
java.lang.RuntimeException: java.lang.RuntimeException: java.lang.NullPointerException
at org.gephi.desktop.importer.DesktopImportControllerUI$9.run(DesktopImportControllerUI.java:375)
at org.gephi.utils.longtask.api.LongTaskExecutor$RunningLongTask.run(LongTaskExecutor.java:251)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
at java.util.concurrent.FutureTask.run(FutureTask.java:166)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
at java.lang.Thread.run(Thread.java:722)
Caused by: java.lang.RuntimeException: java.lang.NullPointerException
at org.gephi.io.importer.plugin.database.ImporterEdgeList.execute(ImporterEdgeList.java:92)
at org.gephi.io.importer.impl.ImportControllerImpl.importDatabase(ImportControllerImpl.java:214)
at org.gephi.desktop.importer.DesktopImportControllerUI$9.run(DesktopImportControllerUI.java:369)
... 7 more
Caused by: java.lang.NullPointerException
at org.gephi.io.importer.impl.ImportContainerImpl.getNode(ImportContainerImpl.java:166)
at org.gephi.io.importer.impl.ImportContainerImpl.getNode(ImportContainerImpl.java:80)
at org.gephi.io.importer.plugin.database.ImporterEdgeList.injectEdgeProperty(ImporterEdgeList.java:395)
at org.gephi.io.importer.plugin.database.ImporterEdgeList.getEdges(ImporterEdgeList.java:206)
at org.gephi.io.importer.plugin.database.ImporterEdgeList.importData(ImporterEdgeList.java:130)
at org.gephi.io.importer.plugin.database.ImporterEdgeList.execute(ImporterEdgeList.java:89)
... 9 more

@eduramiba eduramiba was assigned Nov 21, 2012
@eduramiba eduramiba added a commit that referenced this issue Dec 7, 2012
@eduramiba eduramiba Fix Issue #691 8e6e2ce
@eduramiba eduramiba closed this Dec 7, 2012
@mbastian mbastian added Fix Released and removed Fix Committed labels Nov 21, 2015
@eduramiba eduramiba was unassigned by mbastian Feb 4, 2016
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