srvyr focuses on calculating summary statistics from survey data, such
as the mean, total or quantile. It allows for the use of many dplyr
verbs, such as
mutate, the convenience of
pipe-able functions, rlang’s style of non-standard evaluation and more
consistent return types than the survey package.
You can try it out:
install.packages("srvyr") # or for development version # devtools::install_github("gergness/srvyr")
First, describe the variables that define the survey’s structure with
as_survey()with the bare column names of the names that
you would use in functions from the survey package like
library(srvyr, warn.conflicts = FALSE) data(api, package = "survey") dstrata <- apistrat %>% as_survey_design(strata = stype, weights = pw)
Now many of the dplyr verbs are available.
mutate()adds or modifies a variable.
dstrata <- dstrata %>% mutate(api_diff = api00 - api99)
summarise()calculates summary statistics such as mean, total, quantile or ratio.
dstrata %>% summarise(api_diff = survey_mean(api_diff, vartype = "ci")) #> api_diff api_diff_low api_diff_upp #> 1 32.89252 28.79413 36.99091
summarise()creates summaries by groups.
dstrata %>% group_by(stype) %>% summarise(api_diff = survey_mean(api_diff, vartype = "ci")) #> # A tibble: 3 x 4 #> stype api_diff api_diff_low api_diff_upp #> <fct> <dbl> <dbl> <dbl> #> 1 E 38.6 33.1 44.0 #> 2 H 8.46 1.74 15.2 #> 3 M 26.4 20.4 32.4
- Functions from the survey package are still available:
my_model <- survey::svyglm(api99 ~ stype, dstrata) summary(my_model) #> #> Call: #> svyglm(formula = api99 ~ stype, design = dstrata) #> #> Survey design: #> Called via srvyr #> #> Coefficients: #> Estimate Std. Error t value Pr(>|t|) #> (Intercept) 635.87 13.34 47.669 <2e-16 *** #> stypeH -18.51 20.68 -0.895 0.372 #> stypeM -25.67 21.42 -1.198 0.232 #> --- #> Signif. codes: 0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1 #> #> (Dispersion parameter for gaussian family taken to be 16409.56) #> #> Number of Fisher Scoring iterations: 2
What people are saying about srvyr
[srvyr] lets us use the survey library’s functions within a data analysis pipeline in a familiar way.
– Kieran Healy, in Data Visualization: A practical introduction
–Thomas Lumley, in the Biased and Inefficient blog
I do appreciate bug reports, suggestions and pull requests! I started this as a way to learn about R package development, and am still learning, so you’ll have to bear with me. Please review the Contributor Code of Conduct, as all participants are required to abide by its terms.