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MUltiScale enrIchment Calling for ChIP-Seq Datasets
Logistic regression fitting code designed for use with CUDA. Rather than speeding up the running time of a single regression, the code performs the regression in parallel on hundreds of samples.
Negative binomial regression fitting code in C++. Adapted from R source code.
Mutations Overburdening Annotations Tool
Large-scale Analysis of Recurrent Variants in noncoding Annotations
Identifying and ranking peak regions in ChIP-Seq experiments