3 switch nargin pwd ans = 'e:\MainWork\WIP\gibbon' dbcont testGibbon -> Test file:1 of 59 DEMO_AnyBody_force_analysys.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 15:54:34 [Warning: smeshStruct.smeshName input will be replaced by smeshStruct.modelName in future releases!] [> In runTetGen (line 173) In DEMO_AnyBody_force_analysys (line 208) In run (line 91) In testGibbon (line 72)] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 15:54:34 [Warning: smeshStruct.smeshName input will be replaced by smeshStruct.modelName in future releases!] [> In writeBasicSmesh (line 19) In runTetGen (line 253) In DEMO_AnyBody_force_analysys (line 208) In run (line 91) In testGibbon (line 72)] ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 15:54:34 --- Running TetGen to mesh input boundary--- 19-Dec-2017 15:54:34 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.smesh. Initializing memorypools. tetrahedron per block: 8188. Size of a point: 128 bytes. Size of a tetrahedron: 112 (112) bytes. Size of a shellface: 192 (192) bytes. Initializing robust predicates. sizeof(double) = 8 machine epsilon = 2.22045e-016 [IEEE 754 64-bit macheps] Delaunizing vertices... Permuting vertices. Sorting vertices. Incrementally inserting vertices. Delaunay seconds: 0.016 Point sorting seconds: 0 Creating surface mesh ... 5916 (8874) subfaces (segments). Surface mesh seconds: 0.004 Recovering boundaries... Recovering segments. 8874 (0) segments are recovered (missing). Recovering facets. 5916 (0) subfaces are recovered (missing). Boundary recovery seconds: 0.01 Segment recovery seconds: 0.006 Facet recovery seconds: 0.004 Removing exterior tetrahedra ... Spreading region attributes. Found 1 domain. Exterior tets removal seconds: 0.006 Recovering Delaunayness... Initial obj = 1144577110755.3479 Final obj = 1144577101956.8596 Delaunay recovery seconds: 0.002 Refining mesh... Min radiu-edge ratio = 1. Min dihedral angle = 0. Splitting bad quality tets. Added 5765 (0,0,5765) Steiner points. Performed 2 flips. Refinement seconds: 0.129 Optimizing mesh... Optimization level = 2. Optimization scheme = 7. Number of iteration = 3. Min_Max dihed angle = 165. Removed 558 edges. Optimization seconds: 0.017 Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.1.node. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.1.ele. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.1.face. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.1.edge. Output seconds: 0.133 Total running seconds: 0.317 Statistics: Input points: 2960 Input facets: 5916 Input segments: 8874 Input holes: 0 Input regions: 1 Mesh points: 8725 Mesh tetrahedra: 44809 Mesh faces: 92576 Mesh faces on exterior boundary: 5916 Mesh faces on input facets: 5916 Mesh edges on input segments: 8874 Steiner points inside domain: 5765 Mesh quality statistics: Smallest volume: 0.72062 | Largest volume: 89.37 Shortest edge: 1.9158 | Longest edge: 11.878 Smallest asp.ratio: 1.2386 | Largest asp.ratio: 17.937 Smallest facangle: 11.701 | Largest facangle: 154.2220 Smallest dihedral: 5.7235 | Largest dihedral: 172.3646 Aspect ratio histogram: < 1.5 : 1197 | 6 - 10 : 645 1.5 - 2 : 15650 | 10 - 15 : 41 2 - 2.5 : 16692 | 15 - 25 : 5 2.5 - 3 : 6230 | 25 - 50 : 0 3 - 4 : 2997 | 50 - 100 : 0 4 - 6 : 1352 | 100 - : 0 (A tetrahedron's aspect ratio is its longest edge length divided by its smallest side height) Face angle histogram: 0 - 10 degrees: 0 | 90 - 100 degrees: 9964 10 - 20 degrees: 17 | 100 - 110 degrees: 3421 20 - 30 degrees: 1236 | 110 - 120 degrees: 625 30 - 40 degrees: 24445 | 120 - 130 degrees: 80 40 - 50 degrees: 58962 | 130 - 140 degrees: 15 50 - 60 degrees: 65267 | 140 - 150 degrees: 2 60 - 70 degrees: 57846 | 150 - 160 degrees: 1 70 - 80 degrees: 34511 | 160 - 170 degrees: 0 80 - 90 degrees: 21336 | 170 - 180 degrees: 0 Dihedral angle histogram: 0 - 5 degrees: 0 | 80 - 110 degrees: 59006 5 - 10 degrees: 125 | 110 - 120 degrees: 8350 10 - 20 degrees: 3664 | 120 - 130 degrees: 4973 20 - 30 degrees: 6987 | 130 - 140 degrees: 3275 30 - 40 degrees: 15602 | 140 - 150 degrees: 1996 40 - 50 degrees: 32655 | 150 - 160 degrees: 1477 50 - 60 degrees: 47035 | 160 - 170 degrees: 541 60 - 70 degrees: 47629 | 170 - 175 degrees: 1 70 - 80 degrees: 35538 | 175 - 180 degrees: 0 Minimum input dihedral angle is 130.66 (degree). Memory usage statistics: Maximum number of tetrahedra: 51254 Maximum number of tet blocks (blocksize = 8188): 7 Approximate memory for tetrahedral mesh (bytes): 11,400,736 Approximate memory for extra pointers (bytes): 1,715,408 Approximate memory for algorithms (bytes): 3,483,728 Approximate memory for working arrays (bytes): 1,371,088 Approximate total used memory (bytes): 17,970,960 --- Done --- 19-Dec-2017 15:54:36 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 15:54:36 --- Done --- 19-Dec-2017 15:54:36 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:54:41 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining node loads ----> Adding nodal loads ----> Adding nodal loads ----> Adding nodal loads Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_AnyBody_force_analysys (line 397) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:54:46 testGibbon -> Test file:2 of 59 DEMO_FEBio_XML_import.m loadPath = 'E:\MainWork\WIP\GIBBON\data\FEB' modelName = 'E:\MainWork\WIP\GIBBON\data\FEB\tempModel.feb' testGibbon -> Test file:3 of 59 DEMO_FEBio_XML_replacing_node_field.m Adding Geometry level ----> Adding node field 9.0579194e-01, 9.6488854e-01, 9.1573553e-01 1.2698682e-01, 1.5761308e-01, 7.9220733e-01 9.1337586e-01, 9.7059278e-01, 9.5949243e-01 6.3235925e-01, 9.5716695e-01, 6.5574070e-01 9.7540405e-02, 4.8537565e-01, 3.5711679e-02 2.7849822e-01, 8.0028047e-01, 8.4912931e-01 5.4688152e-01, 1.4188634e-01, 9.3399325e-01 9.5750684e-01, 4.2176128e-01, 6.7873515e-01 7.5774013e-01, 3.1709948e-01, 7.5468668e-01 7.4313247e-01, 9.5022205e-01, 2.7602508e-01 3.9222702e-01, 3.4446081e-02, 6.7970268e-01 6.5547789e-01, 4.3874436e-01, 6.5509800e-01 1.7118669e-01, 3.8155846e-01, 1.6261174e-01 7.0604609e-01, 7.6551679e-01, 1.1899768e-01 3.1832846e-02, 7.9519990e-01, 4.9836405e-01 2.7692298e-01, 1.8687260e-01, 9.5974396e-01 4.6171391e-02, 4.8976440e-01, 3.4038573e-01 9.7131781e-02, 4.4558620e-01, 5.8526775e-01 8.2345783e-01, 6.4631301e-01, 2.2381194e-01 6.9482862e-01, 7.0936483e-01, 7.5126706e-01 testGibbon -> Test file:4 of 59 DEMO_FEBio_active_contraction_01.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:54:49 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_active_contraction_01 (line 248) In run (line 91) In testGibbon (line 72)] [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_active_contraction_01 (line 248) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:54:49 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:54:49 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:54:49 ------- converged at time : 0.0125 ------- converged at time : 0.0275 ------- converged at time : 0.0435 ------- converged at time : 0.0599 ------- converged at time : 0.0730338 ------- converged at time : 0.0882873 ------- converged at time : 0.104389 ------- converged at time : 0.120829 ------- converged at time : 0.137406 ------- converged at time : 0.170667 ------- converged at time : 0.207538 ------- converged at time : 0.242693 ------- converged at time : 0.277849 ------- converged at time : 0.320658 ------- converged at time : 0.361476 ------- converged at time : 0.41413 ------- converged at time : 0.476254 ------- converged at time : 0.545952 ------- converged at time : 0.621711 ------- converged at time : 0.702318 ------- converged at time : 0.786804 ------- converged at time : 0.874393 ------- converged at time : 0.964463 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:54:52 testGibbon -> Test file:5 of 59 DEMO_FEBio_active_responsive_interface.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 15:54:55 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 15:54:55 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 15:54:55 --- Running TetGen to mesh input boundary--- 19-Dec-2017 15:54:55 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. Delaunizing vertices... Delaunay seconds: 0.012 Creating surface mesh ... Surface mesh seconds: 0.002 Recovering boundaries... Boundary recovery seconds: 0.003 Removing exterior tetrahedra ... Spreading region attributes. Exterior tets removal seconds: 0.002 Recovering Delaunayness... Delaunay recovery seconds: 0.001 Refining mesh... Refinement seconds: 0.06 Optimizing mesh... Optimization seconds: 0.009 Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.node. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.ele. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.face. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.edge. Output seconds: 0.085 Total running seconds: 0.174 Statistics: Input points: 1597 Input facets: 3268 Input segments: 4865 Input holes: 0 Input regions: 2 Mesh points: 4877 Mesh tetrahedra: 26273 Mesh faces: 54032 Mesh faces on exterior boundary: 2972 Mesh faces on input facets: 3268 Mesh edges on input segments: 4865 Steiner points inside domain: 3280 --- Done --- 19-Dec-2017 15:54:55 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 15:54:55 --- Done --- 19-Dec-2017 15:54:55 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:54:57 Adding Module level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding tet4 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding LoadData level ----> Defining load curves Adding Step level ----> Adding Module field ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Control field Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_active_responsive_interface (line 549) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:55:13 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:55:13 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:55:15 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 ------- converged at time : 1.05 ------- converged at time : 1.1 ------- converged at time : 1.15 ------- converged at time : 1.2 ------- converged at time : 1.25 ------- converged at time : 1.3 ------- converged at time : 1.35 ------- converged at time : 1.4 ------- converged at time : 1.45 ------- converged at time : 1.5 ------- converged at time : 1.55 ------- converged at time : 1.6 ------- converged at time : 1.65 ------- converged at time : 1.7 ------- converged at time : 1.75 ------- converged at time : 1.8 ------- converged at time : 1.85 ------- converged at time : 1.9 ------- converged at time : 1.95 ------- converged at time : 2 ------- converged at time : 2.05 ------- converged at time : 2.1 ------- converged at time : 2.15 ------- converged at time : 2.2 ------- converged at time : 2.25 ------- converged at time : 2.3 ------- converged at time : 2.35 ------- converged at time : 2.4 ------- converged at time : 2.45 ------- converged at time : 2.5 ------- converged at time : 2.55 ------- converged at time : 2.6 ------- converged at time : 2.65 ------- converged at time : 2.7 ------- converged at time : 2.75 ------- converged at time : 2.8 ------- converged at time : 2.85 ------- converged at time : 2.9 ------- converged at time : 2.95 ------- converged at time : 3 --- Done --- 19-Dec-2017 15:55:43 testGibbon -> Test file:6 of 59 DEMO_FEBio_bar_force.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:55:54 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining node loads ----> Adding nodal loads ----> Adding nodal loads ----> Adding nodal loads Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:55:54 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:55:54 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:55:54 ------- converged at time : 0.1 ------- converged at time : 0.170714 ------- converged at time : 0.22662 ------- converged at time : 0.273871 ------- converged at time : 0.313806 ------- converged at time : 0.350263 ------- converged at time : 0.383545 ------- converged at time : 0.413928 ------- converged at time : 0.441664 ------- converged at time : 0.466984 ------- converged at time : 0.490099 ------- converged at time : 0.513215 ------- converged at time : 0.53633 ------- converged at time : 0.559445 ------- converged at time : 0.58256 ------- converged at time : 0.605675 ------- converged at time : 0.628791 ------- converged at time : 0.651906 ------- converged at time : 0.675021 ------- converged at time : 0.698136 ------- converged at time : 0.721251 ------- converged at time : 0.744367 ------- converged at time : 0.767482 ------- converged at time : 0.790597 ------- converged at time : 0.813712 ------- converged at time : 0.836828 ------- converged at time : 0.859943 ------- converged at time : 0.883058 ------- converged at time : 0.906173 ------- converged at time : 0.929288 ------- converged at time : 0.952404 ------- converged at time : 0.975519 ------- converged at time : 0.998634 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:55:59 testGibbon -> Test file:7 of 59 DEMO_FEBio_bar_soft_sphere_indentation.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:56:03 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding hex8 element entries.... ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding Contact field ----> Defining contact ----> Setting contact parameters ----> Defining contact surface pair Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_bar_soft_sphere_indentation (line 304) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:56:04 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:56:04 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:56:04 ------- converged at time : 0.04 ------- converged at time : 0.08 ------- converged at time : 0.12 ------- converged at time : 0.16 ------- converged at time : 0.2 ------- converged at time : 0.24 ------- converged at time : 0.28 ------- converged at time : 0.32 ------- converged at time : 0.36 ------- converged at time : 0.4 ------- converged at time : 0.44 ------- converged at time : 0.48 ------- converged at time : 0.52 ------- converged at time : 0.56 ------- converged at time : 0.6 ------- converged at time : 0.64 ------- converged at time : 0.68 ------- converged at time : 0.72 ------- converged at time : 0.76 ------- converged at time : 0.8 ------- converged at time : 0.84 ------- converged at time : 0.88 ------- converged at time : 0.92 ------- converged at time : 0.96 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:56:19 testGibbon -> Test file:8 of 59 DEMO_FEBio_bar_sphere_indentation.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:56:23 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding tri3 element entries.... ----> Adding element data field ----> Thickness data entries found ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Contact field ----> Defining contact ----> Setting contact parameters ----> Defining contact surface pair Adding Constraints level Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_bar_sphere_indentation (line 277) In run (line 91) In testGibbon (line 72)] [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_bar_sphere_indentation (line 277) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:56:25 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:56:25 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:56:25 ------- converged at time : 0.04 ------- converged at time : 0.08 ------- converged at time : 0.12 ------- converged at time : 0.16 ------- converged at time : 0.2 ------- converged at time : 0.24 ------- converged at time : 0.28 ------- converged at time : 0.32 ------- converged at time : 0.36 ------- converged at time : 0.4 ------- converged at time : 0.44 ------- converged at time : 0.48 ------- converged at time : 0.52 ------- converged at time : 0.56 ------- converged at time : 0.6 ------- converged at time : 0.64 ------- converged at time : 0.68 ------- converged at time : 0.72 ------- converged at time : 0.76 ------- converged at time : 0.8 ------- converged at time : 0.84 ------- converged at time : 0.88 ------- converged at time : 0.92 ------- converged at time : 0.96 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:57:05 testGibbon -> Test file:9 of 59 DEMO_FEBio_bar_sphere_indentation_multi_generation.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:57:11 Adding Module level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding tri3 element entries.... ----> Adding element data field ----> Thickness data entries found ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Contact field ----> Defining contact ----> Setting contact parameters ----> Defining contact surface pair Adding Constraints level Adding LoadData level ----> Defining load curves Adding Step level ----> Adding Module field ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Control field Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_bar_sphere_indentation_multi_generation (line 292) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:57:12 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:57:12 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:57:12 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 ------- converged at time : 1.05 ------- converged at time : 1.1 ------- converged at time : 1.15 ------- converged at time : 1.2 ------- converged at time : 1.25 ------- converged at time : 1.3 ------- converged at time : 1.35 ------- converged at time : 1.4 ------- converged at time : 1.45 ------- converged at time : 1.5 ------- converged at time : 1.55 ------- converged at time : 1.6 ------- converged at time : 1.65 ------- converged at time : 1.7 ------- converged at time : 1.75 ------- converged at time : 1.8 ------- converged at time : 1.85 ------- converged at time : 1.9 ------- converged at time : 1.95 ------- converged at time : 2 --- Done --- 19-Dec-2017 15:57:22 testGibbon -> Test file:10 of 59 DEMO_FEBio_bar_sphere_indentation_multi_step.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:57:27 Adding Module level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding tri3 element entries.... ----> Adding element data field ----> Thickness data entries found ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Constraints level Adding LoadData level ----> Defining load curves Adding Step level ----> Adding Module field ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Contact field ----> Defining contact ----> Setting contact parameters ----> Defining contact surface pair ----> Adding Control field Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_bar_sphere_indentation_multi_step (line 284) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:57:28 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:57:28 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:57:28 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 ------- converged at time : 1.1 ------- converged at time : 1.2 ------- converged at time : 1.3 ------- converged at time : 1.4 ------- converged at time : 1.5 ------- converged at time : 1.6 ------- converged at time : 1.7 ------- converged at time : 1.8 ------- converged at time : 1.9 ------- converged at time : 2 ------- converged at time : 2.05 ------- converged at time : 2.1 ------- converged at time : 2.15 ------- converged at time : 2.2 ------- converged at time : 2.25 ------- converged at time : 2.3 ------- converged at time : 2.35 ------- converged at time : 2.4 ------- converged at time : 2.45 ------- converged at time : 2.5 ------- converged at time : 2.55 ------- converged at time : 2.6 ------- converged at time : 2.65 ------- converged at time : 2.68955 ------- converged at time : 2.73033 ------- converged at time : 2.76482 ------- converged at time : 2.7963 ------- converged at time : 2.82998 ------- converged at time : 2.86365 ------- converged at time : 2.89732 ------- converged at time : 2.92807 ------- converged at time : 2.95882 ------- converged at time : 2.99184 ------- converged at time : 3 --- Done --- 19-Dec-2017 15:57:34 testGibbon -> Test file:11 of 59 DEMO_FEBio_bar_twist.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:57:37 Adding Module level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding LoadData level ----> Defining load curves Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:57:40 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:57:40 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:57:41 ------- converged at time : 1 ------- converged at time : 2 ------- converged at time : 3 ------- converged at time : 4 ------- converged at time : 5 ------- converged at time : 6 ------- converged at time : 7 ------- converged at time : 8 ------- converged at time : 9 ------- converged at time : 10 ------- converged at time : 11 ------- converged at time : 12 ------- converged at time : 13 ------- converged at time : 14 ------- converged at time : 15 ------- converged at time : 16 ------- converged at time : 17 ------- converged at time : 18 ------- converged at time : 19 ------- converged at time : 20 ------- converged at time : 21 ------- converged at time : 22 ------- converged at time : 23 ------- converged at time : 24 ------- converged at time : 25 ------- converged at time : 26 ------- converged at time : 27 ------- converged at time : 28 ------- converged at time : 29 ------- converged at time : 30 ------- converged at time : 31 ------- converged at time : 32 ------- converged at time : 33 ------- converged at time : 34 ------- converged at time : 35 ------- converged at time : 36 ------- converged at time : 37 ------- converged at time : 38 ------- converged at time : 39 ------- converged at time : 40 ------- converged at time : 41 ------- converged at time : 42 ------- converged at time : 43 ------- converged at time : 44 ------- converged at time : 45 ------- converged at time : 46 ------- converged at time : 47 ------- converged at time : 48 ------- converged at time : 49 ------- converged at time : 50 --- Done --- 19-Dec-2017 15:57:48 testGibbon -> Test file:12 of 59 DEMO_FEBio_beam_L_force.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:57:52 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining node loads ----> Adding nodal loads ----> Adding nodal loads ----> Adding nodal loads Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:57:52 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:57:52 Waiting for log file... [Warning: --- FAILED: Log file was not created in time. FEBio likely failed prior to logfile creation! --- 19-Dec-2017 15:57:55] [> In runMonitorFEBio (line 157) In DEMO_FEBio_beam_L_force (line 357) In run (line 91) In testGibbon (line 72)] [Warning: Try setting FEBioRunStruct.runMode to "internal" to see potential errors prior to log file creation] [> In runMonitorFEBio (line 159) In DEMO_FEBio_beam_L_force (line 357) In run (line 91) In testGibbon (line 72)] --- Failed or ended! --- 19-Dec-2017 15:57:55 testGibbon -> Test file:13 of 59 DEMO_FEBio_beam_bending.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:57:56 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining surface loads Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_beam_bending (line 176) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:57:56 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:57:56 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:57:57 ------- converged at time : 0.1 ------- converged at time : 0.179059 ------- converged at time : 0.245878 ------- converged at time : 0.302351 ------- converged at time : 0.350082 ------- converged at time : 0.393654 ------- converged at time : 0.433431 ------- converged at time : 0.469744 ------- converged at time : 0.502893 ------- converged at time : 0.533155 ------- converged at time : 0.563416 ------- converged at time : 0.593678 ------- converged at time : 0.62394 ------- converged at time : 0.654202 ------- converged at time : 0.684464 ------- converged at time : 0.714725 ------- converged at time : 0.744987 ------- converged at time : 0.775249 ------- converged at time : 0.805511 ------- converged at time : 0.835773 ------- converged at time : 0.866034 ------- converged at time : 0.896296 ------- converged at time : 0.926558 ------- converged at time : 0.95682 ------- converged at time : 0.987082 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:58:00 testGibbon -> Test file:14 of 59 DEMO_FEBio_block_biaxial_loading_stiffness_analysis.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:02 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:58:02 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:02 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:02 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:58:03 testGibbon -> Test file:15 of 59 DEMO_FEBio_block_tension_compression_shear.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:06 Adding Module level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding LoadData level ----> Defining load curves Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:58:07 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:07 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:07 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 ------- converged at time : 1.05 ------- converged at time : 1.1 ------- converged at time : 1.15 ------- converged at time : 1.2 ------- converged at time : 1.25 ------- converged at time : 1.3 ------- converged at time : 1.35 ------- converged at time : 1.4 ------- converged at time : 1.45 ------- converged at time : 1.5 ------- converged at time : 1.55 ------- converged at time : 1.6 ------- converged at time : 1.65 ------- converged at time : 1.7 ------- converged at time : 1.75 ------- converged at time : 1.8 ------- converged at time : 1.85 ------- converged at time : 1.9 ------- converged at time : 1.95 ------- converged at time : 2 ------- converged at time : 2.05 ------- converged at time : 2.1 ------- converged at time : 2.15 ------- converged at time : 2.2 ------- converged at time : 2.25 ------- converged at time : 2.3 ------- converged at time : 2.35 ------- converged at time : 2.4 ------- converged at time : 2.45 ------- converged at time : 2.5 ------- converged at time : 2.55 ------- converged at time : 2.6 ------- converged at time : 2.65 ------- converged at time : 2.7 ------- converged at time : 2.75 ------- converged at time : 2.8 ------- converged at time : 2.85 ------- converged at time : 2.9 ------- converged at time : 2.95 ------- converged at time : 3 ------- converged at time : 3.05 ------- converged at time : 3.1 ------- converged at time : 3.15 ------- converged at time : 3.2 ------- converged at time : 3.25 ------- converged at time : 3.3 ------- converged at time : 3.35 ------- converged at time : 3.4 ------- converged at time : 3.45 ------- converged at time : 3.5 ------- converged at time : 3.55 ------- converged at time : 3.6 ------- converged at time : 3.65 ------- converged at time : 3.7 ------- converged at time : 3.75 ------- converged at time : 3.8 ------- converged at time : 3.85 ------- converged at time : 3.9 ------- converged at time : 3.95 ------- converged at time : 4 ------- converged at time : 4.05 ------- converged at time : 4.1 ------- converged at time : 4.15 ------- converged at time : 4.2 ------- converged at time : 4.25 ------- converged at time : 4.3 ------- converged at time : 4.35 ------- converged at time : 4.4 ------- converged at time : 4.45 ------- converged at time : 4.5 ------- converged at time : 4.55 ------- converged at time : 4.6 ------- converged at time : 4.65 ------- converged at time : 4.7 ------- converged at time : 4.75 ------- converged at time : 4.8 ------- converged at time : 4.85 ------- converged at time : 4.9 ------- converged at time : 4.95 ------- converged at time : 5 --- Done --- 19-Dec-2017 15:58:09 testGibbon -> Test file:16 of 59 DEMO_FEBio_block_uniaxial_compression.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:14 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:58:15 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:15 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:15 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:58:15 testGibbon -> Test file:17 of 59 DEMO_FEBio_block_uniaxial_compression_biphasic_ramp_hold.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:17 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:58:17 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:17 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:17 ------- converged at time : 0.001 ------- converged at time : 0.006 ------- converged at time : 0.031 ------- converged at time : 0.153 ------- converged at time : 0.3526 ------- converged at time : 0.61428 ------- converged at time : 0.925624 ------- converged at time : 1.2767 ------- converged at time : 1.65956 ------- converged at time : 2.06785 ------- converged at time : 2.49648 ------- converged at time : 2.94138 ------- converged at time : 3.39931 ------- converged at time : 3.86764 ------- converged at time : 4.34432 ------- converged at time : 4.82765 ------- converged at time : 5.1 --- Done --- 19-Dec-2017 15:58:19 testGibbon -> Test file:18 of 59 DEMO_FEBio_block_uniaxial_compression_fibre_reinforced.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:21 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:58:21 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:21 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:21 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.81 ------- converged at time : 0.878 ------- converged at time : 0.9152 ------- converged at time : 0.96496 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:58:22 testGibbon -> Test file:19 of 59 DEMO_FEBio_block_uniaxial_compression_stiffness_analysis.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:24 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:58:24 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:24 =========================================================================== ________ _________ _________ __ _________ | |\ | |\ | |\ | |\ / \\ | ____|| | ____|| | __ || |__|| | ___ || | |\___\| | |\___\| | |\_| || \_\| | // \ || | || | || | || | || __ | || | || | ||__ | ||__ | ||_| || | |\ | || | || | |\ | |\ | \\ | || | || | || | ___|| | ___|| | ___ || | || | || | || | |\__\| | |\__\| | |\__| || | || | || | || | || | || | || | || | || | || | || | || | ||___ | ||__| || | || | \\__/ || | || | |\ | || | || | || |___|| |________|| |__________|| |__|| \_________// F I N I T E E L E M E N T S F O R B I O M E C H A N I C S --- v e r s i o n - 2 . 6 . 4 . 9570 --- Musculoskeletal Research Laboratory University of Utah http://febio.org FEBio is a registered trademark. copyright (c) 2006-2016 - All rights reserved This is the NON-COMMERCIAL version of FEBio. This version may only be used for non-commercial purposes as described in the license agreement. To obtain a valid commercial license file, please contact the developers. =========================================================================== Reading file E:\MainWork\WIP\GIBBON\data\temp\tempModel.feb ...SUCCESS! ===== beginning time step 1 : 0.05 ===== ===== reforming stiffness matrix: Nr of equations ........................... : 540 Nr of nonzeroes in stiffness matrix ....... : 14670 1 Nonlinear solution status: time= 0.05 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.405772e-002 1.694621e-007 0.000000e+000 energy 1.158355e-001 2.329965e-004 1.158355e-003 displacement 1.794046e+000 1.794046e+000 1.794046e-006 2 Nonlinear solution status: time= 0.05 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.405772e-002 2.852070e-011 0.000000e+000 energy 1.158355e-001 2.760949e-008 1.158355e-003 displacement 1.794046e+000 1.015945e-004 1.812461e-006 3 Nonlinear solution status: time= 0.05 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.405772e-002 7.672419e-015 0.000000e+000 energy 1.158355e-001 1.172343e-012 1.158355e-003 displacement 1.794046e+000 1.233895e-008 1.812620e-006 ------- converged at time : 0.05 ===== beginning time step 2 : 0.1 ===== 1 Nonlinear solution status: time= 0.1 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.545239e-002 1.769814e-007 0.000000e+000 energy 1.195577e-001 2.434871e-004 1.195577e-003 displacement 1.831645e+000 1.831645e+000 1.831645e-006 2 Nonlinear solution status: time= 0.1 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.545239e-002 3.104208e-011 0.000000e+000 energy 1.195577e-001 2.970010e-008 1.195577e-003 displacement 1.831645e+000 1.092374e-004 1.851171e-006 3 Nonlinear solution status: time= 0.1 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.545239e-002 8.923045e-015 0.000000e+000 energy 1.195577e-001 1.298660e-012 1.195577e-003 displacement 1.831645e+000 1.365326e-008 1.851345e-006 ------- converged at time : 0.1 ===== beginning time step 3 : 0.15 ===== 1 Nonlinear solution status: time= 0.15 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.696082e-002 1.849460e-007 0.000000e+000 energy 1.234616e-001 2.546134e-004 1.234616e-003 displacement 1.871525e+000 1.871525e+000 1.871525e-006 2 Nonlinear solution status: time= 0.15 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.696082e-002 3.384301e-011 0.000000e+000 energy 1.234616e-001 3.198174e-008 1.234616e-003 displacement 1.871525e+000 1.175765e-004 1.892248e-006 3 Nonlinear solution status: time= 0.15 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.696082e-002 1.040918e-014 0.000000e+000 energy 1.234616e-001 1.442279e-012 1.234616e-003 displacement 1.871525e+000 1.513164e-008 1.892437e-006 ------- converged at time : 0.15 ===== beginning time step 4 : 0.2 ===== 1 Nonlinear solution status: time= 0.2 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.859466e-002 1.933890e-007 0.000000e+000 energy 1.275594e-001 2.664172e-004 1.275594e-003 displacement 1.913866e+000 1.913866e+000 1.913866e-006 2 Nonlinear solution status: time= 0.2 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.859466e-002 3.695843e-011 0.000000e+000 energy 1.275594e-001 3.447517e-008 1.275594e-003 displacement 1.913866e+000 1.266866e-004 1.935878e-006 3 Nonlinear solution status: time= 0.2 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 2.859466e-002 1.217250e-014 0.000000e+000 energy 1.275594e-001 1.604277e-012 1.275594e-003 displacement 1.913866e+000 1.679625e-008 1.936084e-006 ------- converged at time : 0.2 ===== beginning time step 5 : 0.25 ===== 1 Nonlinear solution status: time= 0.25 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.036691e-002 2.023464e-007 0.000000e+000 energy 1.318642e-001 2.789501e-004 1.318642e-003 displacement 1.958859e+000 1.958859e+000 1.958859e-006 2 Nonlinear solution status: time= 0.25 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.036691e-002 4.043084e-011 0.000000e+000 energy 1.318642e-001 3.720349e-008 1.318642e-003 displacement 1.958859e+000 1.366517e-004 1.982260e-006 3 Nonlinear solution status: time= 0.25 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.036691e-002 1.427036e-014 0.000000e+000 energy 1.318642e-001 1.787337e-012 1.318642e-003 displacement 1.958859e+000 1.867383e-008 1.982485e-006 ------- converged at time : 0.25 ===== beginning time step 6 : 0.3 ===== 1 Nonlinear solution status: time= 0.3 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.229221e-002 2.118574e-007 0.000000e+000 energy 1.363904e-001 2.922687e-004 1.363904e-003 displacement 2.006712e+000 2.006712e+000 2.006712e-006 2 Nonlinear solution status: time= 0.3 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.229221e-002 4.430947e-011 0.000000e+000 energy 1.363904e-001 4.019268e-008 1.363904e-003 displacement 2.006712e+000 1.475660e-004 2.031613e-006 3 Nonlinear solution status: time= 0.3 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.229221e-002 1.677323e-014 0.000000e+000 energy 1.363904e-001 1.994578e-012 1.363904e-003 displacement 2.006712e+000 2.079545e-008 2.031859e-006 ------- converged at time : 0.3 ===== beginning time step 7 : 0.35 ===== 1 Nonlinear solution status: time= 0.35 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.438704e-002 2.219646e-007 0.000000e+000 energy 1.411533e-001 3.064347e-004 1.411533e-003 displacement 2.057654e+000 2.057654e+000 2.057654e-006 2 Nonlinear solution status: time= 0.35 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.438704e-002 4.865151e-011 0.000000e+000 energy 1.411533e-001 4.347204e-008 1.411533e-003 displacement 2.057654e+000 1.595359e-004 2.084176e-006 3 Nonlinear solution status: time= 0.35 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.438704e-002 1.976791e-014 0.000000e+000 energy 1.411533e-001 2.229641e-012 1.411533e-003 displacement 2.057654e+000 2.319726e-008 2.084445e-006 ------- converged at time : 0.35 ===== beginning time step 8 : 0.4 ===== 1 Nonlinear solution status: time= 0.4 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.667001e-002 2.327147e-007 0.000000e+000 energy 1.461700e-001 3.215155e-004 1.461700e-003 displacement 2.111936e+000 2.111936e+000 2.111936e-006 2 Nonlinear solution status: time= 0.4 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.667001e-002 5.352355e-011 0.000000e+000 energy 1.461700e-001 4.707466e-008 1.461700e-003 displacement 2.111936e+000 1.726814e-004 2.140212e-006 3 Nonlinear solution status: time= 0.4 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.667001e-002 2.336170e-014 0.000000e+000 energy 1.461700e-001 2.496782e-012 1.461700e-003 displacement 2.111936e+000 2.592144e-008 2.140506e-006 ------- converged at time : 0.4 ===== beginning time step 9 : 0.45 ===== 1 Nonlinear solution status: time= 0.45 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.916219e-002 2.441588e-007 0.000000e+000 energy 1.514589e-001 3.375853e-004 1.514589e-003 displacement 2.169834e+000 2.169834e+000 2.169834e-006 2 Nonlinear solution status: time= 0.45 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.916219e-002 5.900339e-011 0.000000e+000 energy 1.514589e-001 5.103793e-008 1.514589e-003 displacement 2.169834e+000 1.871382e-004 2.200009e-006 3 Nonlinear solution status: time= 0.45 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 3.916219e-002 2.768770e-014 0.000000e+000 energy 1.514589e-001 2.800991e-012 1.514589e-003 displacement 2.169834e+000 2.901730e-008 2.200331e-006 ------- converged at time : 0.45 ===== beginning time step 10 : 0.5 ===== 1 Nonlinear solution status: time= 0.5 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 4.188744e-002 2.563527e-007 0.000000e+000 energy 1.570401e-001 3.547252e-004 1.570401e-003 displacement 2.231649e+000 2.231649e+000 2.231649e-006 2 Nonlinear solution status: time= 0.5 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 4.188744e-002 6.518218e-011 0.000000e+000 energy 1.570401e-001 5.540426e-008 1.570401e-003 displacement 2.231649e+000 2.030602e-004 2.263883e-006 3 Nonlinear solution status: time= 0.5 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 4.188744e-002 3.291163e-014 0.000000e+000 energy 1.570401e-001 3.148132e-012 1.570401e-003 displacement 2.231649e+000 3.254261e-008 2.264236e-006 ------- converged at time : 0.5 ===== beginning time step 11 : 0.55 ===== 1 Nonlinear solution status: time= 0.55 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 4.487292e-002 2.693576e-007 0.000000e+000 energy 1.629357e-001 3.730244e-004 1.629357e-003 displacement 2.297714e+000 2.297714e+000 2.297714e-006 2 Nonlinear solution status: time= 0.55 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 4.487292e-002 7.216704e-011 0.000000e+000 energy 1.629357e-001 6.022174e-008 1.629357e-003 displacement 2.297714e+000 2.206219e-004 2.332186e-006 3 Nonlinear solution status: time= 0.55 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 4.487292e-002 3.924055e-014 0.000000e+000 energy 1.629357e-001 3.545112e-012 1.629357e-003 displacement 2.297714e+000 3.656525e-008 2.332573e-006 ------- converged at time : 0.55 ===== beginning time step 12 : 0.6 ===== 1 Nonlinear solution status: time= 0.6 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 4.814957e-002 2.832407e-007 0.000000e+000 energy 1.691699e-001 3.925811e-004 1.691699e-003 displacement 2.368399e+000 2.368399e+000 2.368399e-006 2 Nonlinear solution status: time= 0.6 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 4.814957e-002 8.008425e-011 0.000000e+000 energy 1.691699e-001 6.554509e-008 1.691699e-003 displacement 2.368399e+000 2.400215e-004 2.405302e-006 3 Nonlinear solution status: time= 0.6 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 4.814957e-002 4.693419e-014 0.000000e+000 energy 1.691699e-001 4.000089e-012 1.691699e-003 displacement 2.368399e+000 4.116512e-008 2.405727e-006 ------- converged at time : 0.6 ===== beginning time step 13 : 0.65 ===== 1 Nonlinear solution status: time= 0.65 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 5.175274e-002 2.980757e-007 0.000000e+000 energy 1.757694e-001 4.135034e-004 1.757694e-003 displacement 2.444107e+000 2.444107e+000 2.444107e-006 2 Nonlinear solution status: time= 0.65 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 5.175274e-002 8.908316e-011 0.000000e+000 energy 1.757694e-001 7.143661e-008 1.757694e-003 displacement 2.444107e+000 2.614852e-004 2.483657e-006 3 Nonlinear solution status: time= 0.65 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 5.175274e-002 5.631962e-014 0.000000e+000 energy 1.757694e-001 4.522724e-012 1.757694e-003 displacement 2.444107e+000 4.643655e-008 2.484125e-006 ------- converged at time : 0.65 ===== beginning time step 14 : 0.7 ===== 1 Nonlinear solution status: time= 0.7 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 5.572292e-002 3.139438e-007 0.000000e+000 energy 1.827634e-001 4.359103e-004 1.827634e-003 displacement 2.525288e+000 2.525288e+000 2.525288e-006 2 Nonlinear solution status: time= 0.7 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 5.572292e-002 9.934102e-011 0.000000e+000 energy 1.827634e-001 7.796745e-008 1.827634e-003 displacement 2.525288e+000 2.852707e-004 2.567725e-006 3 Nonlinear solution status: time= 0.7 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 5.572292e-002 6.781039e-014 0.000000e+000 energy 1.827634e-001 5.124491e-012 1.827634e-003 displacement 2.525288e+000 5.249119e-008 2.568239e-006 ------- converged at time : 0.7 ===== beginning time step 15 : 0.75 ===== 1 Nonlinear solution status: time= 0.75 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 6.010664e-002 3.309343e-007 0.000000e+000 energy 1.901842e-001 4.599337e-004 1.901842e-003 displacement 2.612440e+000 2.612440e+000 2.612440e-006 2 Nonlinear solution status: time= 0.75 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 6.010664e-002 1.110689e-010 0.000000e+000 energy 1.901842e-001 8.521893e-008 1.901842e-003 displacement 2.612440e+000 3.116730e-004 2.658027e-006 3 Nonlinear solution status: time= 0.75 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 6.010664e-002 8.193161e-014 0.000000e+000 energy 1.901842e-001 5.819052e-012 1.901842e-003 displacement 2.612440e+000 5.946149e-008 2.658594e-006 ------- converged at time : 0.75 ===== beginning time step 16 : 0.8 ===== 1 Nonlinear solution status: time= 0.8 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 6.495750e-002 3.491457e-007 0.000000e+000 energy 1.980676e-001 4.857192e-004 1.980676e-003 displacement 2.706113e+000 2.706113e+000 2.706113e-006 2 Nonlinear solution status: time= 0.8 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 6.495750e-002 1.245191e-010 0.000000e+000 energy 1.980676e-001 9.328426e-008 1.980676e-003 displacement 2.706113e+000 3.410299e-004 2.755145e-006 3 Nonlinear solution status: time= 0.8 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 6.495750e-002 9.935295e-014 0.000000e+000 energy 1.980676e-001 6.622725e-012 1.980676e-003 displacement 2.706113e+000 6.750507e-008 2.755770e-006 ------- converged at time : 0.8 ===== beginning time step 17 : 0.85 ===== 1 Nonlinear solution status: time= 0.85 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 7.033743e-002 3.686867e-007 0.000000e+000 energy 2.064529e-001 5.134281e-004 2.064529e-003 displacement 2.806922e+000 2.806922e+000 2.806922e-006 2 Nonlinear solution status: time= 0.85 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 7.033743e-002 1.399941e-010 0.000000e+000 energy 2.064529e-001 1.022704e-007 2.064529e-003 displacement 2.806922e+000 3.737294e-004 2.859726e-006 3 Nonlinear solution status: time= 0.85 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 7.033743e-002 1.209323e-013 0.000000e+000 energy 2.064529e-001 7.555059e-012 2.064529e-003 displacement 2.806922e+000 7.680995e-008 2.860416e-006 ------- converged at time : 0.85 ===== beginning time step 18 : 0.9 ===== 1 Nonlinear solution status: time= 0.9 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 7.631824e-002 3.896775e-007 0.000000e+000 energy 2.153841e-001 5.432393e-004 2.153841e-003 displacement 2.915548e+000 2.915548e+000 2.915548e-006 2 Nonlinear solution status: time= 0.9 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 7.631824e-002 1.578582e-010 0.000000e+000 energy 2.153841e-001 1.123006e-007 2.153841e-003 displacement 2.915548e+000 4.102178e-004 2.972488e-006 3 Nonlinear solution status: time= 0.9 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 7.631824e-002 1.477739e-013 0.000000e+000 energy 2.153841e-001 8.639543e-012 2.153841e-003 displacement 2.915548e+000 8.760113e-008 2.973252e-006 ------- converged at time : 0.9 ===== beginning time step 19 : 0.95 ===== 1 Nonlinear solution status: time= 0.95 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 8.298344e-002 4.122509e-007 0.000000e+000 energy 2.249100e-001 5.753516e-004 2.249100e-003 displacement 3.032753e+000 3.032753e+000 3.032753e-006 2 Nonlinear solution status: time= 0.95 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 8.298344e-002 1.785516e-010 0.000000e+000 energy 2.249100e-001 1.235167e-007 2.249100e-003 displacement 3.032753e+000 4.510097e-004 3.094236e-006 3 Nonlinear solution status: time= 0.95 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 8.298344e-002 1.813057e-013 0.000000e+000 energy 2.249100e-001 9.904496e-012 2.249100e-003 displacement 3.032753e+000 1.001486e-007 3.095082e-006 ------- converged at time : 0.95 MUST POINT CONTROLLER: adjusting time step. dt = 0.05 ===== beginning time step 20 : 1 ===== 1 Nonlinear solution status: time= 1 stiffness updates = 0 right hand side evaluations = 2 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 9.043048e-002 4.365542e-007 0.000000e+000 energy 2.350849e-001 6.099863e-004 2.350849e-003 displacement 3.159388e+000 3.159388e+000 3.159388e-006 2 Nonlinear solution status: time= 1 stiffness updates = 1 right hand side evaluations = 3 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 9.043048e-002 2.026086e-010 0.000000e+000 energy 2.350849e-001 1.360827e-007 2.350849e-003 displacement 3.159388e+000 4.966996e-004 3.225870e-006 3 Nonlinear solution status: time= 1 stiffness updates = 2 right hand side evaluations = 4 stiffness matrix reformations = 1 step from line search = 1.000000 convergence norms : INITIAL CURRENT REQUIRED residual 9.043048e-002 2.233837e-013 0.000000e+000 energy 2.350849e-001 1.138417e-011 2.350849e-003 displacement 3.159388e+000 1.147772e-007 3.226808e-006 ------- converged at time : 1 N O N L I N E A R I T E R A T I O N I N F O R M A T I O N Number of time steps completed .................... : 20 Total number of equilibrium iterations ............ : 60 Average number of equilibrium iterations .......... : 3 Total number of right hand evaluations ............ : 80 Total number of stiffness reformations ............ : 20 Time in linear solver: 0:00:00 Elapsed time : 0:00:02 N O R M A L T E R M I N A T I O N Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:26 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:58:26 testGibbon -> Test file:20 of 59 DEMO_FEBio_block_uniaxial_compression_viscoelastic_load_unload.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:29 Adding Module level Adding Control level Adding Globals level Adding Material level [Warning: Elastic field (containing material structure) missing. Assuming "old" viscoelastic specification type. It is recommended to update code.] [> In addMaterialLevel_FEB (line 125) In febStruct2febFile (line 65) In DEMO_FEBio_block_uniaxial_compression_viscoelastic_load_unload (line 241) In run (line 91) In testGibbon (line 72)] Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_block_uniaxial_compression_viscoelastic_load_unload (line 241) In run (line 91) In testGibbon (line 72)] [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_block_uniaxial_compression_viscoelastic_load_unload (line 241) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:58:29 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:29 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:29 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 ------- converged at time : 1.05 ------- converged at time : 1.1 ------- converged at time : 1.15 ------- converged at time : 1.2 ------- converged at time : 1.25 ------- converged at time : 1.3 ------- converged at time : 1.35 ------- converged at time : 1.4 ------- converged at time : 1.45 ------- converged at time : 1.5 ------- converged at time : 1.55 ------- converged at time : 1.6 ------- converged at time : 1.65 ------- converged at time : 1.7 ------- converged at time : 1.75 ------- converged at time : 1.8 ------- converged at time : 1.85 ------- converged at time : 1.9 ------- converged at time : 1.95 ------- converged at time : 2 --- Done --- 19-Dec-2017 15:58:31 testGibbon -> Test file:21 of 59 DEMO_FEBio_block_uniaxial_compression_viscoelastic_ramp_hold.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:33 Adding Module level Adding Control level Adding Globals level Adding Material level [Warning: Elastic field (containing material structure) missing. Assuming "old" viscoelastic specification type. It is recommended to update code.] [> In addMaterialLevel_FEB (line 125) In febStruct2febFile (line 65) In DEMO_FEBio_block_uniaxial_compression_viscoelastic_ramp_hold (line 238) In run (line 91) In testGibbon (line 72)] Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_block_uniaxial_compression_viscoelastic_ramp_hold (line 238) In run (line 91) In testGibbon (line 72)] [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_block_uniaxial_compression_viscoelastic_ramp_hold (line 238) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:58:33 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:33 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:33 ------- converged at time : 0.001 ------- converged at time : 0.006 ------- converged at time : 0.031 ------- converged at time : 0.151 ------- converged at time : 0.347 ------- converged at time : 0.6038 ------- converged at time : 0.90924 ------- converged at time : 1.25359 ------- converged at time : 1.62907 ------- converged at time : 2.02946 ------- converged at time : 2.44977 ------- converged at time : 2.88601 ------- converged at time : 3.33501 ------- converged at time : 3.79421 ------- converged at time : 4.26157 ------- converged at time : 4.73545 ------- converged at time : 5.21456 ------- converged at time : 5.69785 ------- converged at time : 6.18448 ------- converged at time : 6.67378 ------- converged at time : 7.16523 ------- converged at time : 7.65838 ------- converged at time : 8.15291 ------- converged at time : 8.64852 ------- converged at time : 9.14502 ------- converged at time : 9.64222 ------- converged at time : 10.14 ------- converged at time : 10.6382 ------- converged at time : 11.1367 ------- converged at time : 11.6356 ------- converged at time : 12.1347 ------- converged at time : 12.6339 ------- converged at time : 13.1334 ------- converged at time : 13.6329 ------- converged at time : 14.1325 ------- converged at time : 14.6322 ------- converged at time : 15.132 ------- converged at time : 15.6318 ------- converged at time : 16.1316 ------- converged at time : 16.6315 ------- converged at time : 17.1314 ------- converged at time : 17.6313 ------- converged at time : 18.1313 ------- converged at time : 18.6312 ------- converged at time : 19.1312 ------- converged at time : 19.6311 ------- converged at time : 20.1311 ------- converged at time : 20.6311 ------- converged at time : 21.1311 ------- converged at time : 21.6311 ------- converged at time : 22.131 ------- converged at time : 22.631 ------- converged at time : 23.131 ------- converged at time : 23.631 ------- converged at time : 24.131 ------- converged at time : 24.631 ------- converged at time : 25.131 ------- converged at time : 25.631 ------- converged at time : 26.131 ------- converged at time : 26.631 ------- converged at time : 27.131 ------- converged at time : 27.631 ------- converged at time : 28.131 ------- converged at time : 28.631 ------- converged at time : 29.131 ------- converged at time : 29.631 ------- converged at time : 30.131 ------- converged at time : 30.631 ------- converged at time : 31.131 ------- converged at time : 31.631 ------- converged at time : 32.131 ------- converged at time : 32.631 ------- converged at time : 33.131 ------- converged at time : 33.631 ------- converged at time : 34.131 ------- converged at time : 34.631 ------- converged at time : 35.131 ------- converged at time : 35.631 ------- converged at time : 36.131 ------- converged at time : 36.631 ------- converged at time : 37.131 ------- converged at time : 37.631 ------- converged at time : 38.131 ------- converged at time : 38.631 ------- converged at time : 39.131 ------- converged at time : 39.631 ------- converged at time : 40.131 ------- converged at time : 40.631 ------- converged at time : 41.131 ------- converged at time : 41.631 ------- converged at time : 42.131 ------- converged at time : 42.631 ------- converged at time : 43.131 ------- converged at time : 43.631 ------- converged at time : 44.131 ------- converged at time : 44.631 ------- converged at time : 45.131 ------- converged at time : 45.631 ------- converged at time : 46.131 ------- converged at time : 46.631 ------- converged at time : 47.131 ------- converged at time : 47.631 ------- converged at time : 48.131 ------- converged at time : 48.631 ------- converged at time : 49.131 ------- converged at time : 49.631 ------- converged at time : 50.131 ------- converged at time : 50.631 ------- converged at time : 51.131 ------- converged at time : 51.631 ------- converged at time : 52.131 ------- converged at time : 52.631 ------- converged at time : 53.131 ------- converged at time : 53.631 ------- converged at time : 54.131 ------- converged at time : 54.631 ------- converged at time : 55.131 ------- converged at time : 55.631 ------- converged at time : 56.131 ------- converged at time : 56.631 ------- converged at time : 57.131 ------- converged at time : 57.631 ------- converged at time : 58.131 ------- converged at time : 58.631 ------- converged at time : 59.131 ------- converged at time : 59.631 ------- converged at time : 60.131 ------- converged at time : 60.631 ------- converged at time : 61.131 ------- converged at time : 61.631 ------- converged at time : 62.131 ------- converged at time : 62.631 ------- converged at time : 63.131 ------- converged at time : 63.631 ------- converged at time : 64.131 ------- converged at time : 64.631 ------- converged at time : 65.131 ------- converged at time : 65.631 ------- converged at time : 66.131 ------- converged at time : 66.631 ------- converged at time : 67.131 ------- converged at time : 67.631 ------- converged at time : 68.131 ------- converged at time : 68.631 ------- converged at time : 69.131 ------- converged at time : 69.631 ------- converged at time : 70.131 ------- converged at time : 70.631 ------- converged at time : 71.131 ------- converged at time : 71.631 ------- converged at time : 72.131 ------- converged at time : 72.631 ------- converged at time : 73.131 ------- converged at time : 73.631 ------- converged at time : 74.131 ------- converged at time : 74.631 ------- converged at time : 75.131 ------- converged at time : 75.631 ------- converged at time : 76.131 ------- converged at time : 76.631 ------- converged at time : 77.131 ------- converged at time : 77.631 ------- converged at time : 78.131 ------- converged at time : 78.631 ------- converged at time : 79.131 ------- converged at time : 79.631 ------- converged at time : 80.131 ------- converged at time : 80.631 ------- converged at time : 81.131 ------- converged at time : 81.631 ------- converged at time : 82.131 ------- converged at time : 82.631 ------- converged at time : 83.131 ------- converged at time : 83.631 ------- converged at time : 84.131 ------- converged at time : 84.631 ------- converged at time : 85.131 ------- converged at time : 85.631 ------- converged at time : 86.131 ------- converged at time : 86.631 ------- converged at time : 87.131 ------- converged at time : 87.631 ------- converged at time : 88.131 ------- converged at time : 88.631 ------- converged at time : 89.131 ------- converged at time : 89.631 ------- converged at time : 90.131 ------- converged at time : 90.631 ------- converged at time : 91.131 ------- converged at time : 91.631 ------- converged at time : 92.131 ------- converged at time : 92.631 ------- converged at time : 93.131 ------- converged at time : 93.631 ------- converged at time : 94.131 ------- converged at time : 94.631 ------- converged at time : 95.131 ------- converged at time : 95.631 ------- converged at time : 96.131 ------- converged at time : 96.631 ------- converged at time : 97.131 ------- converged at time : 97.631 ------- converged at time : 98.131 ------- converged at time : 98.631 ------- converged at time : 99.131 ------- converged at time : 99.631 ------- converged at time : 100 --- Done --- 19-Dec-2017 15:58:36 testGibbon -> Test file:22 of 59 DEMO_FEBio_continuous_fibre_distribution.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:41 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_continuous_fibre_distribution (line 292) In run (line 91) In testGibbon (line 72)] [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_continuous_fibre_distribution (line 292) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:58:41 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:41 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:41 ------- converged at time : 0.04 ------- converged at time : 0.08 ------- converged at time : 0.12 ------- converged at time : 0.16 ------- converged at time : 0.2 ------- converged at time : 0.24 ------- converged at time : 0.28 ------- converged at time : 0.32 ------- converged at time : 0.36 ------- converged at time : 0.4 ------- converged at time : 0.44 ------- converged at time : 0.48 ------- converged at time : 0.52 ------- converged at time : 0.56 ------- converged at time : 0.6 ------- converged at time : 0.64 ------- converged at time : 0.68 ------- converged at time : 0.72 ------- converged at time : 0.76 ------- converged at time : 0.8 ------- converged at time : 0.84 ------- converged at time : 0.88 ------- converged at time : 0.92 ------- converged at time : 0.96 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:58:42 testGibbon -> Test file:23 of 59 DEMO_FEBio_cube_multi_generation.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:44 Adding Module level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Step level ----> Adding Module field ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Control field Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:58:45 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:45 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:45 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 ------- converged at time : 1.1 ------- converged at time : 1.2 ------- converged at time : 1.3 ------- converged at time : 1.4 ------- converged at time : 1.5 ------- converged at time : 1.6 ------- converged at time : 1.7 ------- converged at time : 1.8 ------- converged at time : 1.9 ------- converged at time : 2 --- Done --- 19-Dec-2017 15:58:46 testGibbon -> Test file:24 of 59 DEMO_FEBio_cube_multi_step.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:49 Adding Module level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding LoadData level ----> Defining load curves Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_cube_multi_step (line 223) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:58:49 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:49 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:50 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 ------- converged at time : 1.05 ------- converged at time : 1.1 ------- converged at time : 1.15 ------- converged at time : 1.2 ------- converged at time : 1.25 ------- converged at time : 1.3 ------- converged at time : 1.35 ------- converged at time : 1.4 ------- converged at time : 1.45 ------- converged at time : 1.5 ------- converged at time : 1.55 ------- converged at time : 1.6 ------- converged at time : 1.65 ------- converged at time : 1.7 ------- converged at time : 1.75 ------- converged at time : 1.8 ------- converged at time : 1.85 ------- converged at time : 1.9 ------- converged at time : 1.95 ------- converged at time : 2 --- Done --- 19-Dec-2017 15:58:51 testGibbon -> Test file:25 of 59 DEMO_FEBio_cube_tension.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:53 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:58:53 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:53 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:53 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 --- Done --- 19-Dec-2017 15:58:54 testGibbon -> Test file:26 of 59 DEMO_FEBio_cube_viscoelastic_aniso.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:58:55 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 15:58:55 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:58:55 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:58:55 ------- converged at time : 0.001 ------- converged at time : 0.006 ------- converged at time : 0.02 ------- converged at time : 0.0412 ------- converged at time : 0.06816 ------- converged at time : 0.099728 ------- converged at time : 0.134982 ------- converged at time : 0.173186 ------- converged at time : 0.213749 ------- converged at time : 0.256199 ------- converged at time : 0.300159 ------- converged at time : 0.345327 ------- converged at time : 0.391462 ------- converged at time : 0.43837 ------- converged at time : 0.485896 ------- converged at time : 0.533916 ------- converged at time : 0.582333 ------- converged at time : 0.631067 ------- converged at time : 0.680053 ------- converged at time : 0.729243 ------- converged at time : 0.778594 ------- converged at time : 0.828075 ------- converged at time : 0.87766 ------- converged at time : 0.927328 ------- converged at time : 0.977063 ------- converged at time : 1.02685 ------- converged at time : 1.07668 ------- converged at time : 1.12654 ------- converged at time : 1.17644 ------- converged at time : 1.22635 ------- converged at time : 1.27628 ------- converged at time : 1.32622 ------- converged at time : 1.37618 ------- converged at time : 1.42614 ------- converged at time : 1.47611 ------- converged at time : 1.52609 ------- converged at time : 1.57607 ------- converged at time : 1.62606 ------- converged at time : 1.67605 ------- converged at time : 1.72604 ------- converged at time : 1.77603 ------- converged at time : 1.82602 ------- converged at time : 1.87602 ------- converged at time : 1.92602 ------- converged at time : 1.97601 ------- converged at time : 2.02601 ------- converged at time : 2.07601 ------- converged at time : 2.12601 ------- converged at time : 2.17601 ------- converged at time : 2.226 ------- converged at time : 2.276 ------- converged at time : 2.326 ------- converged at time : 2.376 ------- converged at time : 2.426 ------- converged at time : 2.476 ------- converged at time : 2.526 ------- converged at time : 2.576 ------- converged at time : 2.626 ------- converged at time : 2.676 ------- converged at time : 2.726 ------- converged at time : 2.776 ------- converged at time : 2.826 ------- converged at time : 2.876 ------- converged at time : 2.926 ------- converged at time : 2.976 ------- converged at time : 3 --- Done --- 19-Dec-2017 15:58:57 testGibbon -> Test file:27 of 59 DEMO_FEBio_cylinder_embedded_indentor_01.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 15:58:59 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 15:58:59 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 15:59:00 --- Running TetGen to mesh input boundary--- 19-Dec-2017 15:59:00 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. Delaunizing vertices... Delaunay seconds: 0.035 Creating surface mesh ... Surface mesh seconds: 0.004 Recovering boundaries... Boundary recovery seconds: 0.009 Removing exterior tetrahedra ... Spreading region attributes. Exterior tets removal seconds: 0.003 Suppressing Steiner points ... Steiner suppression seconds: 0 Recovering Delaunayness... Delaunay recovery seconds: 0.003 Refining mesh... Refinement seconds: 0.1 Optimizing mesh... Optimization seconds: 0.014 Jettisoning redundant points. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.node. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.ele. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.face. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.edge. Output seconds: 0.154 Total running seconds: 0.322 Statistics: Input points: 2664 Input facets: 5324 Input segments: 7986 Input holes: 0 Input regions: 1 Mesh points: 7794 Mesh tetrahedra: 40967 Mesh faces: 84596 Mesh faces on exterior boundary: 5324 Mesh faces on input facets: 5324 Mesh edges on input segments: 7986 Steiner points inside domain: 5130 --- Done --- 19-Dec-2017 15:59:00 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 15:59:00 --- Done --- 19-Dec-2017 15:59:00 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 15:59:03 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_cylinder_embedded_indentor_01 (line 349) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 15:59:08 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 15:59:08 Waiting for log file... Proceeding to check log file...19-Dec-2017 15:59:08 ------- converged at time : 0.025 ------- converged at time : 0.05 ------- converged at time : 0.075 ------- converged at time : 0.1 ------- converged at time : 0.125 ------- converged at time : 0.15 ------- converged at time : 0.175 ------- converged at time : 0.2 ------- converged at time : 0.225 ------- converged at time : 0.25 ------- converged at time : 0.275 ------- converged at time : 0.3 ------- converged at time : 0.325 ------- converged at time : 0.35 ------- converged at time : 0.375 ------- converged at time : 0.4 ------- converged at time : 0.425 ------- converged at time : 0.45 ------- converged at time : 0.475 ------- converged at time : 0.5 ------- converged at time : 0.525 ------- converged at time : 0.55 ------- converged at time : 0.575 ------- converged at time : 0.6 ------- converged at time : 0.625 ------- converged at time : 0.65 ------- converged at time : 0.675 ------- converged at time : 0.7 ------- converged at time : 0.725 ------- converged at time : 0.75 ------- converged at time : 0.775 ------- converged at time : 0.8 ------- converged at time : 0.825 ------- converged at time : 0.85 ------- converged at time : 0.875 ------- converged at time : 0.9 ------- converged at time : 0.925 ------- converged at time : 0.95 ------- converged at time : 0.975 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:00:09 testGibbon -> Test file:28 of 59 DEMO_FEBio_cylinder_spherical_head_indentor.m [Warning: Some input points are not referenced by the triangulation.] [> In DEMO_FEBio_cylinder_spherical_head_indentor (line 191) In run (line 91) In testGibbon (line 72)] [Warning: Some input points are not referenced by the triangulation.] [> In DEMO_FEBio_cylinder_spherical_head_indentor (line 191) In run (line 91) In testGibbon (line 72)] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:00:20 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:00:20 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:00:20 --- Writing MTR file --- 19-Dec-2017 16:00:20 --- Running TetGen to mesh initial Delaunay tesselation using sizing function--- 19-Dec-2017 16:00:20 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.smesh. Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.mtr. Cannot access file E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.b.node. Delaunizing vertices... Delaunay seconds: 0.003 Creating surface mesh ... Surface mesh seconds: 0.001 Recovering boundaries... Boundary recovery seconds: 0.001 Removing exterior tetrahedra ... Spreading region attributes. Exterior tets removal seconds: 0 Recovering Delaunayness... Delaunay recovery seconds: 0 Refining mesh... Refinement seconds: 0.024 Optimizing mesh... Optimization seconds: 0.003 Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.node. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.ele. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.face. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.edge. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.mtr. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.p2t. Output seconds: 0.056 Total running seconds: 0.088 Statistics: Input points: 398 Input facets: 792 Input segments: 1188 Input holes: 0 Input regions: 1 Mesh points: 1559 Mesh tetrahedra: 8477 Mesh faces: 17350 Mesh faces on exterior boundary: 792 Mesh faces on input facets: 792 Mesh edges on input segments: 1188 Steiner points inside domain: 1161 --- Done --- 19-Dec-2017 16:00:20 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:00:20 --- Done --- 19-Dec-2017 16:00:20 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:00:23 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet10 element entries.... ----> Adding tri3 element entries.... ----> Adding element data field ----> Thickness data entries found ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Contact field ----> Defining contact ----> Setting contact parameters ----> Defining contact surface pair Adding Constraints level Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_cylinder_spherical_head_indentor (line 485) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:00:26 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:00:26 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:00:27 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:02:44 testGibbon -> Test file:29 of 59 DEMO_FEBio_disc_probe_indentation.m [Warning: Some input points are not referenced by the triangulation.] [> In DEMO_FEBio_disc_probe_indentation (line 194) In run (line 91) In testGibbon (line 72)] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:02:55 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:02:55 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:02:56 --- Writing MTR file --- 19-Dec-2017 16:02:56 --- Running TetGen to mesh initial Delaunay tesselation using sizing function--- 19-Dec-2017 16:02:56 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.mtr. Cannot access file E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.b.node. Delaunizing vertices... Delaunay seconds: 0.004 Creating surface mesh ... Surface mesh seconds: 0.001 Recovering boundaries... Boundary recovery seconds: 0.001 Removing exterior tetrahedra ... Spreading region attributes. Exterior tets removal seconds: 0 Recovering Delaunayness... Delaunay recovery seconds: 0.001 Refining mesh... Refinement seconds: 0.026 Optimizing mesh... Optimization seconds: 0.002 Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.node. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.ele. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.face. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.edge. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.mtr. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.p2t. Output seconds: 0.073 Total running seconds: 0.108 Statistics: Input points: 522 Input facets: 1040 Input segments: 1560 Input holes: 0 Input regions: 1 Mesh points: 1750 Mesh tetrahedra: 9251 Mesh faces: 19022 Mesh faces on exterior boundary: 1040 Mesh faces on input facets: 1040 Mesh edges on input segments: 1560 Steiner points inside domain: 1228 --- Done --- 19-Dec-2017 16:02:56 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:02:56 --- Done --- 19-Dec-2017 16:02:56 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:02:56 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding tri3 element entries.... ----> Adding element data field ----> Thickness data entries found ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Contact field ----> Defining contact ----> Setting contact parameters ----> Defining contact surface pair Adding Constraints level Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_disc_probe_indentation (line 487) In run (line 91) In testGibbon (line 72)] [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_disc_probe_indentation (line 487) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:02:59 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:02:59 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:02:59 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:03:03 testGibbon -> Test file:30 of 59 DEMO_FEBio_hexLattice_compression.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:03:07 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:03:08 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:03:08 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:03:09 ------- converged at time : 0.066667 ------- converged at time : 0.133334 ------- converged at time : 0.200001 ------- converged at time : 0.266668 ------- converged at time : 0.333335 ------- converged at time : 0.400002 ------- converged at time : 0.466669 ------- converged at time : 0.533336 ------- converged at time : 0.600003 ------- converged at time : 0.66667 ------- converged at time : 0.733337 ------- converged at time : 0.800004 ------- converged at time : 0.866671 ------- converged at time : 0.933338 ------- converged at time : 1.00001 --- Done --- 19-Dec-2017 16:03:19 testGibbon -> Test file:31 of 59 DEMO_FEBio_iFEA_uniaxial_01.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:03:26 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:03:26 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:03:26 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:03:26 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:03:27 SETTING MATERIAL PARAMETERS... Proposed (norm.): 1.0000000000000000e+00 1.0000000000000000e+00 Proposed : 6.4464428523599996e-04 3.0000000000000000e+00 Set (constr.) : 6.4464428523599996e-04 3.0000000000000000e+00 Done SETTING MATERIAL PARAMETERS... Proposed (norm.): 1.0009999999999999e+00 1.0000000000000000e+00 Proposed : 6.4528892952123585e-04 3.0000000000000000e+00 Set (constr.) : 6.4584027880999404e-04 3.0000000000000000e+00 Done SETTING MATERIAL PARAMETERS... Proposed (norm.): 1.0000000000000000e+00 1.0009999999999999e+00 Proposed : 6.4464428523599996e-04 3.0029999999999997e+00 Set (constr.) : 6.4464428523599996e-04 3.0055662191396384e+00 Done First-Order Norm of Iteration Func-count Residual optimality Lambda step 0 3 2.27193 11.4 0.01 SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.3041473879874541e-01 1.4561599254748412e+00 Proposed : 4.7085768721875682e-04 4.3684797764245236e+00 Set (constr.) : 2.8577972810327716e-04 5.6280072751443626e+00 Done SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.3141473879874541e-01 1.4561599254748412e+00 Proposed : 4.7150233150399282e-04 4.3684797764245236e+00 Set (constr.) : 2.8695941985962373e-04 5.6280072751443626e+00 Done SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.3041473879874541e-01 1.4576160854003160e+00 Proposed : 4.7085768721875682e-04 4.3728482562009479e+00 Set (constr.) : 2.8577972810327716e-04 5.6366593919901105e+00 Done 1 6 0.172659 3.76 0.001 0.529866 SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.6132954344893611e-01 1.5363473886746914e+00 Proposed : 4.9078673936568955e-04 4.6090421660240741e+00 Set (constr.) : 3.2364688187895438e-04 6.1067016392761619e+00 Done SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.6232954344893611e-01 1.5363473886746914e+00 Proposed : 4.9143138365092555e-04 4.6090421660240741e+00 Set (constr.) : 3.2491607244640339e-04 6.1067016392761619e+00 Done SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.6132954344893611e-01 1.5378837360633661e+00 Proposed : 4.9078673936568955e-04 4.6136512081900989e+00 Set (constr.) : 3.2364688187895438e-04 6.1159169971117562e+00 Done 2 9 0.0102599 0.372 0.0001 0.0859404 SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.5994555545035858e-01 1.5252683224114449e+00 Proposed : 4.8989455941157137e-04 4.5758049672343351e+00 Set (constr.) : 3.2189453098547074e-04 6.0402949919581710e+00 Done SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.6094555545035858e-01 1.5252683224114449e+00 Proposed : 4.9053920369680737e-04 4.5758049672343351e+00 Set (constr.) : 3.2316020128959249e-04 6.0402949919581710e+00 Done SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.5994555545035858e-01 1.5267935907338563e+00 Proposed : 4.8989455941157137e-04 4.5803807722015693e+00 Set (constr.) : 3.2189453098547074e-04 6.0494322489954797e+00 Done 3 12 0.00897384 0.00371 1e-05 0.0111652 Local minimum possible. lsqnonlin stopped because the relative size of the current step is less than the selected value of the step size tolerance. <stopping criteria details> SETTING MATERIAL PARAMETERS... Proposed (norm.): 7.5994555545035858e-01 1.5252683224114449e+00 Proposed : 4.8989455941157137e-04 4.5758049672343351e+00 Set (constr.) : 3.2189453098547074e-04 6.0402949919581710e+00 Done P_opt=3.2189453098547074e-04,6.0402949919581710e+00 testGibbon -> Test file:32 of 59 DEMO_FEBio_iFEA_uniaxial_transiso_01.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:03:44 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:03:44 SETTING MATERIAL PARAMETERS... Proposed (norm.): 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 Proposed : 6.6182906450000002e-04 2.0000011857416000e+00 9.0604513499999997e-05 2.2995781822623371e+02 3.1728247084040002e+00 Set (constr.) : 6.6182906450000002e-04 2.0000011857416000e+00 9.0604513499999997e-05 2.2995781822623371e+02 3.1728247084040002e+00 Done SETTING FIBRE DIRECTIONS... ----> Creating MatAxis entries Done SETTING FIBRE DIRECTIONS... ----> Creating MatAxis entries Done ans = 1.1952 1.1952 0.7000 1.1318 1.2620 0.7000 testGibbon -> Test file:33 of 59 DEMO_FEBio_iFEA_uniaxial_transiso_02.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:03:50 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:03:51 SETTING MATERIAL PARAMETERS... Proposed (norm.): 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 Proposed : 3.0574999999999998e-04 2.0070000000000001e+00 9.0589999999999998e-05 2.3509999999999999e+02 3.2940000000000000e+00 Set (constr.) : 3.0574999999999998e-04 2.0070000000000001e+00 9.0589999999999998e-05 2.3509999999999999e+02 3.2940000000000000e+00 Done SETTING FIBRE DIRECTIONS... ----> Creating MatAxis entries Done SETTING FIBRE DIRECTIONS... ----> Creating MatAxis entries Done ans = 1.1952 1.1952 0.7000 1.1317 1.2621 0.7000 testGibbon -> Test file:34 of 59 DEMO_FEBio_iFEA_uniaxial_transiso_03.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:03:56 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:03:56 SETTING MATERIAL PARAMETERS... Proposed (norm.): 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 Proposed : 3.0574504020000002e-04 2.0065098364181999e+00 9.0589636800000002e-05 2.3509200705586269e+02 3.2942189118587999e+00 Set (constr.) : 3.0574504020000002e-04 2.0065098364181999e+00 9.0589636800000002e-05 2.3509200705586269e+02 3.2942189118587999e+00 Done SETTING FIBRE DIRECTIONS... ----> Creating MatAxis entries Done SETTING FIBRE DIRECTIONS... ----> Creating MatAxis entries Done ans = 1.1952 1.1952 0.7000 1.2630 1.1309 0.7000 testGibbon -> Test file:35 of 59 DEMO_FEBio_layered_spatvar.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:04:02 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_layered_spatvar (line 225) In run (line 91) In testGibbon (line 72)] [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_layered_spatvar (line 225) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:04:09 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:04:09 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:04:10 ------- converged at time : 0.1 ------- converged at time : 0.19273 ------- converged at time : 0.27873 ------- converged at time : 0.358499 ------- converged at time : 0.432499 ------- converged at time : 0.501158 ------- converged at time : 0.569817 ------- converged at time : 0.638476 ------- converged at time : 0.702191 ------- converged at time : 0.765905 ------- converged at time : 0.825041 ------- converged at time : 0.884178 ------- converged at time : 0.943314 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:04:41 testGibbon -> Test file:36 of 59 DEMO_FEBio_multi_scale_analysis.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:04:56 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:04:56 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:04:56 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:04:56 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:04:56 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:05:02 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:05:11 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:05:11 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:05:12 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:10:29 MException with properties: identifier: 'MATLAB:UndefinedFunction' message: 'Undefined function or variable 'fdsafas'.' cause: {} stack: [3×1 struct] testGibbon -> Test file:37 of 59 DEMO_FEBio_multigen_interface_active.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:10:31 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:10:31 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:10:32 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:10:32 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. Delaunizing vertices... Delaunay seconds: 0.013 Creating surface mesh ... Surface mesh seconds: 0.004 Recovering boundaries... Boundary recovery seconds: 0.004 Removing exterior tetrahedra ... Spreading region attributes. Exterior tets removal seconds: 0.003 Recovering Delaunayness... Delaunay recovery seconds: 0.003 Refining mesh... Refinement seconds: 0.107 Optimizing mesh... Optimization seconds: 0.016 Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.node. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.ele. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.face. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.edge. Output seconds: 0.116 Total running seconds: 0.266 Statistics: Input points: 2189 Input facets: 4466 Input segments: 6655 Input holes: 0 Input regions: 2 Mesh points: 7507 Mesh tetrahedra: 41333 Mesh faces: 84723 Mesh faces on exterior boundary: 4114 Mesh faces on input facets: 4466 Mesh edges on input segments: 6655 Steiner points inside domain: 5318 --- Done --- 19-Dec-2017 16:10:32 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:10:32 --- Done --- 19-Dec-2017 16:10:32 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:10:34 Adding Module level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding tet4 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining surface loads Adding LoadData level ----> Defining load curves Adding Step level ----> Adding Module field ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Control field Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_multigen_interface_active (line 542) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:11:01 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:11:01 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:11:03 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 ------- converged at time : 1.05 ------- converged at time : 1.1 ------- converged at time : 1.15 ------- converged at time : 1.2 ------- converged at time : 1.25 ------- converged at time : 1.3 ------- converged at time : 1.35 ------- converged at time : 1.4 ------- converged at time : 1.45 ------- converged at time : 1.5 ------- converged at time : 1.55 ------- converged at time : 1.6 ------- converged at time : 1.65 ------- converged at time : 1.7 ------- converged at time : 1.75 ------- converged at time : 1.8 ------- converged at time : 1.85 ------- converged at time : 1.9 ------- converged at time : 1.95 ------- converged at time : 2 ------- converged at time : 2.05 ------- converged at time : 2.1 ------- converged at time : 2.15 ------- converged at time : 2.2 ------- converged at time : 2.25 ------- converged at time : 2.3 ------- converged at time : 2.35 ------- converged at time : 2.4 ------- converged at time : 2.45 ------- converged at time : 2.5 ------- converged at time : 2.55 ------- converged at time : 2.6 ------- converged at time : 2.65 ------- converged at time : 2.7 ------- converged at time : 2.75 ------- converged at time : 2.8 ------- converged at time : 2.85 ------- converged at time : 2.9 ------- converged at time : 2.95 ------- converged at time : 3 --- Done --- 19-Dec-2017 16:11:57 testGibbon -> Test file:38 of 59 DEMO_FEBio_skin_sphere_indentation.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:12:12 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding tri3 element entries.... ----> Adding quad4 element entries.... ----> Adding element data field ----> Thickness data entries found ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Contact field ----> Defining contact ----> Setting contact parameters ----> Defining contact surface pair Adding Constraints level Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_skin_sphere_indentation (line 282) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:12:13 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:12:13 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:12:13 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.125 ------- converged at time : 0.155 ------- converged at time : 0.189 ------- converged at time : 0.2262 ------- converged at time : 0.26596 ------- converged at time : 0.286117 ------- converged at time : 0.312243 ------- converged at time : 0.343143 ------- converged at time : 0.377863 ------- converged at time : 0.415567 ------- converged at time : 0.455729 ------- converged at time : 0.476795 ------- converged at time : 0.503647 ------- converged at time : 0.535128 ------- converged at time : 0.567612 ------- converged at time : 0.603598 ------- converged at time : 0.642388 ------- converged at time : 0.683419 ------- converged at time : 0.726244 ------- converged at time : 0.748357 ------- converged at time : 0.776048 ------- converged at time : 0.8082 ------- converged at time : 0.843922 ------- converged at time : 0.882499 ------- converged at time : 0.923361 ------- converged at time : 0.966051 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:12:39 testGibbon -> Test file:39 of 59 DEMO_FEBio_skin_sphere_indentation_tet4_vs_tet10.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:12:42 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:12:42 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:12:42 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:12:42 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:12:43 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:12:43 --- Done --- 19-Dec-2017 16:12:43 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:12:44 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet10 element entries.... ----> Adding tri3 element entries.... ----> Adding tri3 element entries.... ----> Adding element data field ----> Thickness data entries found ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Contact field ----> Defining contact ----> Setting contact parameters ----> Defining contact surface pair Adding Constraints level Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_skin_sphere_indentation_tet4_vs_tet10 (line 363) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:12:46 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:12:46 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:12:46 ------- converged at time : 0.0333335 ------- converged at time : 0.0733337 ------- converged at time : 0.0960005 ------- converged at time : 0.120212 E R R O R T E R M I N A T I O N --- FAILED: FEBio error! Check log-file --- 19-Dec-2017 16:12:57 --- Failed or ended! --- 19-Dec-2017 16:12:57 testGibbon -> Test file:40 of 59 DEMO_FEBio_slab_displacement_loading_01.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:12:58 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:12:58 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:12:58 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:12:58 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:12:58 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:12:58 --- Done --- 19-Dec-2017 16:12:58 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:12:59 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_slab_displacement_loading_01 (line 291) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:13:01 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:13:01 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:13:01 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:13:04 testGibbon -> Test file:41 of 59 DEMO_FEBio_slab_pressure_loading_01.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:13:06 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:13:06 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:13:06 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:13:06 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:13:06 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:13:06 --- Done --- 19-Dec-2017 16:13:06 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:13:07 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining surface loads Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_slab_pressure_loading_01 (line 301) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:13:09 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:13:09 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:13:09 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:13:14 testGibbon -> Test file:42 of 59 DEMO_FEBio_slab_pressure_loading_02.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:13:15 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:13:15 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:13:15 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:13:15 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:13:16 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:13:16 --- Done --- 19-Dec-2017 16:13:16 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:13:17 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining surface loads Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_slab_pressure_loading_02 (line 266) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:13:20 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:13:20 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:13:21 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:13:31 testGibbon -> Test file:43 of 59 DEMO_FEBio_slab_pressure_loading_03.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:13:33 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:13:33 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:13:33 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:13:33 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:13:33 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:13:33 --- Done --- 19-Dec-2017 16:13:34 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:13:35 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining surface loads Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_slab_pressure_loading_03 (line 290) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:13:36 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:13:36 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:13:37 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:13:42 testGibbon -> Test file:44 of 59 DEMO_FEBio_spatially_varying_material_parameters.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:13:44 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_spatially_varying_material_parameters (line 204) In run (line 91) In testGibbon (line 72)] [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_FEBio_spatially_varying_material_parameters (line 204) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:13:47 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:13:47 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:13:47 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:14:14 98 end q_test q_test = 44 if system_dependent('IsDebugMode')==1, dbcont; end testGibbon -> Test file:45 of 59 DEMO_FEBio_strip_multi_step_clamp.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:14:34 Adding Module level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding LoadData level ----> Defining load curves Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Step level ----> Adding Module field ----> Adding Boundary field ----> Defining prescribe type boundary conditions ----> Adding Control field Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:14:38 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:14:38 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:14:38 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 ------- converged at time : 1.05 ------- converged at time : 1.1 ------- converged at time : 1.15 ------- converged at time : 1.2 ------- converged at time : 1.25 ------- converged at time : 1.3 ------- converged at time : 1.35 ------- converged at time : 1.4 ------- converged at time : 1.45 ------- converged at time : 1.5 ------- converged at time : 1.55 ------- converged at time : 1.6 ------- converged at time : 1.65 ------- converged at time : 1.7 ------- converged at time : 1.75 ------- converged at time : 1.8 ------- converged at time : 1.85 ------- converged at time : 1.9 ------- converged at time : 1.95 ------- converged at time : 2 --- Done --- 19-Dec-2017 16:15:01 testGibbon -> Test file:46 of 59 DEMO_FEBio_tongue.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:15:07 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding hex8 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:15:08 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:15:08 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:15:08 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.41 ------- converged at time : 0.478 ------- converged at time : 0.549777 ------- converged at time : 0.627064 ------- converged at time : 0.708894 ------- converged at time : 0.794357 ------- converged at time : 0.882728 ------- converged at time : 0.971728 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:15:09 testGibbon -> Test file:47 of 59 DEMO_FEBio_trabeculae_compression.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:15:13 [Warning: smeshStruct.smeshName input will be replaced by smeshStruct.modelName in future releases!] [> In runTetGen (line 173) In DEMO_FEBio_trabeculae_compression (line 200) In run (line 91) In testGibbon (line 72)] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:15:13 [Warning: smeshStruct.smeshName input will be replaced by smeshStruct.modelName in future releases!] [> In writeBasicSmesh (line 19) In runTetGen (line 253) In DEMO_FEBio_trabeculae_compression (line 200) In run (line 91) In testGibbon (line 72)] ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:15:13 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:15:13 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:15:14 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:15:14 --- Done --- 19-Dec-2017 16:15:14 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:15:16 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:15:22 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:15:22 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:15:23 ------- converged at time : 0.05 ------- converged at time : 0.1 ------- converged at time : 0.15 ------- converged at time : 0.2 ------- converged at time : 0.25 ------- converged at time : 0.3 ------- converged at time : 0.35 ------- converged at time : 0.4 ------- converged at time : 0.45 ------- converged at time : 0.5 ------- converged at time : 0.55 ------- converged at time : 0.6 ------- converged at time : 0.65 ------- converged at time : 0.7 ------- converged at time : 0.75 ------- converged at time : 0.8 ------- converged at time : 0.85 ------- converged at time : 0.9 ------- converged at time : 0.95 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:15:49 98 end q_test q_test = 47 dbcont testGibbon -> Test file:48 of 59 DEMO_MixedTetHexMeshing.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:05 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:16:05 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:16:05 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:05 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.smesh. Delaunizing vertices... Delaunay seconds: 0.024 Creating surface mesh ... Surface mesh seconds: 0.004 Recovering boundaries... Boundary recovery seconds: 0.016 Removing exterior tetrahedra ... Spreading region attributes. Exterior tets removal seconds: 0.004 Suppressing Steiner points ... Steiner suppression seconds: 0 Recovering Delaunayness... Delaunay recovery seconds: 0.006 Refining mesh... Refinement seconds: 0.036 Optimizing mesh... Optimization seconds: 0.007 Jettisoning redundant points. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.1.node. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.1.ele. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.1.face. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.1.edge. Output seconds: 0.064 Total running seconds: 0.161 Statistics: Input points: 2729 Input facets: 5460 Input segments: 8185 Input holes: 1 Input regions: 1 Mesh points: 3528 Mesh tetrahedra: 13980 Mesh faces: 30690 Mesh faces on exterior boundary: 5460 Mesh faces on input facets: 5460 Mesh edges on input segments: 8185 Steiner points inside domain: 799 --- Done --- 19-Dec-2017 16:16:05 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:16:05 --- Done --- 19-Dec-2017 16:16:05 98 end if system_dependent('IsDebugMode')==1, dbcont; end testGibbon -> Test file:49 of 59 DEMO_MixedTetHexMeshing_torus.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:27 [Warning: smeshStruct.smeshName input will be replaced by smeshStruct.modelName in future releases!] [> In runTetGen (line 173) In DEMO_MixedTetHexMeshing_torus (line 214) In run (line 91) In testGibbon (line 72)] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:16:27 [Warning: smeshStruct.smeshName input will be replaced by smeshStruct.modelName in future releases!] [> In writeBasicSmesh (line 19) In runTetGen (line 253) In DEMO_MixedTetHexMeshing_torus (line 214) In run (line 91) In testGibbon (line 72)] ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:16:27 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:27 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.smesh. Initializing memorypools. tetrahedron per block: 8188. Size of a point: 128 bytes. Size of a tetrahedron: 112 (112) bytes. Size of a shellface: 192 (192) bytes. Initializing robust predicates. sizeof(double) = 8 machine epsilon = 2.22045e-016 [IEEE 754 64-bit macheps] Permuting vertices. Sorting vertices. Incrementally inserting vertices. 7188 (10775) subfaces (segments). Recovering segments. 10769 (6) segments are recovered (missing). 10773 (2) segments are recovered (missing). Added 2 Steiner points in volume. Recovering facets. 7188 (0) subfaces are recovered (missing). Removed 2 exterior Steiner vertices. Found 1 domain. Initial obj = 3287.0308670114277 Final obj = 3286.9902285162125 Min radiu-edge ratio = 1.2. Min dihedral angle = 0. Splitting bad quality tets. Added 316 (0,0,316) Steiner points. Performed 1 flips. Optimization level = 2. Optimization scheme = 7. Number of iteration = 3. Min_Max dihed angle = 165. Removed 353 edges. 0 duplicated vertices are removed. 2 unused vertices are removed. --- Done --- 19-Dec-2017 16:16:28 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:16:28 --- Done --- 19-Dec-2017 16:16:28 testGibbon -> Test file:50 of 59 DEMO_additional_colormaps.m testGibbon -> Test file:51 of 59 DEMO_create_run_import_FEBIO_spheres.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:35 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:16:35 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:16:35 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:35 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:16:36 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:16:36 --- Done --- 19-Dec-2017 16:16:36 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:16:37 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding NodeSet field Adding Boundary level ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:16:39 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:16:39 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:16:39 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:16:44 testGibbon -> Test file:52 of 59 DEMO_create_run_import_FEBIO_spheres_pressure.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:46 [Warning: smeshStruct.smeshName input will be replaced by smeshStruct.modelName in future releases!] [> In runTetGen (line 173) In DEMO_create_run_import_FEBIO_spheres_pressure (line 126) In run (line 91) In testGibbon (line 72)] %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:16:46 [Warning: smeshStruct.smeshName input will be replaced by smeshStruct.modelName in future releases!] [> In writeBasicSmesh (line 19) In runTetGen (line 253) In DEMO_create_run_import_FEBIO_spheres_pressure (line 126) In run (line 91) In testGibbon (line 72)] ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:16:46 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:46 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:16:46 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:16:46 --- Done --- 19-Dec-2017 16:16:46 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:16:47 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining surface loads Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field [Warning: Provided path of logfile is replaced by .feb file path. Only provide filename to avoid this warning] [> In addOutputLevel_FEB (line 70) In febStruct2febFile (line 109) In DEMO_create_run_import_FEBIO_spheres_pressure (line 300) In run (line 91) In testGibbon (line 72)] Writing .feb file --- Done --- 19-Dec-2017 16:16:48 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:16:48 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:16:48 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:16:51 testGibbon -> Test file:53 of 59 DEMO_create_run_import_FEBIO_spheres_traction.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:53 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:16:53 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:16:53 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:53 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:16:53 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:16:53 --- Done --- 19-Dec-2017 16:16:53 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:16:54 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding surface field ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions Adding Loads level ----> Defining surface loads Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:17:00 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:17:00 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:17:00 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:17:07 98 end q_test q_test = 53 if system_dependent('IsDebugMode')==1, dbcont; end testGibbon -> Test file:54 of 59 DEMO_femur_STL_surface_improvement.m testGibbon -> Test file:55 of 59 DEMO_geodesic_remeshing.m testGibbon -> Test file:56 of 59 DEMO_import_FEB_export_INP.m --- import_FEB --- IMPORTING .FEB XML ---> Getting nodes ---> Imported 25328 nodes ---> Getting elements ---> Imported 4536 quad4 elements ---> Imported 21252 hex8 elements DONE! --- export_INP --- CREATING NODE AND ELEMENT TEXT FIELDS ---> Creating node text field ---> Creating element text field EXPORTING TO INP FILE... DONE! --- export_INP --- CREATING NODE AND ELEMENT TEXT FIELDS ---> Creating node text field ---> Creating element text field EXPORTING TO INP FILE... DONE! testGibbon -> Test file:57 of 59 DEMO_surface_smooth_methods.m testGibbon -> Test file:58 of 59 DEMO_tetGen_mesh_sizing_function_1.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:18:18 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:18:18 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:18:19 --- Writing MTR file --- 19-Dec-2017 16:18:19 --- Running TetGen to mesh initial Delaunay tesselation using sizing function--- 19-Dec-2017 16:18:19 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.smesh. Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.mtr. Cannot access file E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.b.node. Delaunizing vertices... Delaunay seconds: 0.002 Creating surface mesh ... Surface mesh seconds: 0.001 Constrained Delaunay... Constrained Delaunay seconds: 0.001 Removing exterior tetrahedra ... Spreading region attributes. Exterior tets removal seconds: 0 Refining mesh... Refinement seconds: 0.027 Optimizing mesh... Optimization seconds: 0.002 Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.node. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.ele. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.face. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.edge. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.mtr. Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.p2t. Output seconds: 0.068 Total running seconds: 0.101 Statistics: Input points: 210 Input facets: 416 Input segments: 88 Input holes: 0 Input regions: 1 Mesh points: 1641 Mesh tetrahedra: 7393 Mesh faces: 15644 Mesh faces on exterior boundary: 1716 Mesh faces on input facets: 1716 Mesh edges on input segments: 165 Steiner points on input facets: 573 Steiner points on input segments: 77 Steiner points inside domain: 781 --- Done --- 19-Dec-2017 16:18:19 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:18:19 --- Done --- 19-Dec-2017 16:18:19 testGibbon -> Test file:59 of 59 DEMO_vessel_FEBIO_fibre_mapping.m %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:18:22 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing SMESH file --- 19-Dec-2017 16:18:22 ----> Adding node field ----> Adding facet field ----> Adding holes specification ----> Adding region specification --- Done --- 19-Dec-2017 16:18:22 --- Running TetGen to mesh input boundary--- 19-Dec-2017 16:18:22 Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh. --- Done --- 19-Dec-2017 16:18:22 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Importing TetGen files --- 19-Dec-2017 16:18:22 --- Done --- 19-Dec-2017 16:18:22 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- Writing FEBio XML object --- 19-Dec-2017 16:18:26 Adding Module level Adding Control level Adding Globals level Adding Material level Adding Geometry level ----> Adding node field ----> Adding element field ----> Adding tet4 element entries.... ----> Adding element data field ----> MatAxis data entries found ----> Adding NodeSet field Adding Boundary level ----> Defining fix type boundary conditions ----> Defining prescribe type boundary conditions Adding LoadData level ----> Defining load curves Adding Output level ----> Adding plotfile field ----> Adding logfile field Writing .feb file --- Done --- 19-Dec-2017 16:18:29 %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% --- STARTING FEBIO JOB --- 19-Dec-2017 16:18:29 Waiting for log file... Proceeding to check log file...19-Dec-2017 16:18:29 ------- converged at time : 0.1 ------- converged at time : 0.2 ------- converged at time : 0.3 ------- converged at time : 0.4 ------- converged at time : 0.5 ------- converged at time : 0.6 ------- converged at time : 0.7 ------- converged at time : 0.8 ------- converged at time : 0.9 ------- converged at time : 1 --- Done --- 19-Dec-2017 16:18:31