3 switch nargin
pwd
ans =
'e:\MainWork\WIP\gibbon'
dbcont
testGibbon -> Test file:1 of 59 DEMO_AnyBody_force_analysys.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 15:54:34
[Warning: smeshStruct.smeshName input will be replaced by
smeshStruct.modelName in future releases!]
[> In runTetGen (line 173)
In DEMO_AnyBody_force_analysys (line 208)
In run (line 91)
In testGibbon (line 72)]
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 15:54:34
[Warning: smeshStruct.smeshName input will be replaced by
smeshStruct.modelName in future releases!]
[> In writeBasicSmesh (line 19)
In runTetGen (line 253)
In DEMO_AnyBody_force_analysys (line 208)
In run (line 91)
In testGibbon (line 72)]
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 15:54:34
--- Running TetGen to mesh input boundary--- 19-Dec-2017 15:54:34
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.smesh.
Initializing memorypools.
tetrahedron per block: 8188.
Size of a point: 128 bytes.
Size of a tetrahedron: 112 (112) bytes.
Size of a shellface: 192 (192) bytes.
Initializing robust predicates.
sizeof(double) = 8
machine epsilon = 2.22045e-016 [IEEE 754 64-bit macheps]
Delaunizing vertices...
Permuting vertices.
Sorting vertices.
Incrementally inserting vertices.
Delaunay seconds: 0.016
Point sorting seconds: 0
Creating surface mesh ...
5916 (8874) subfaces (segments).
Surface mesh seconds: 0.004
Recovering boundaries...
Recovering segments.
8874 (0) segments are recovered (missing).
Recovering facets.
5916 (0) subfaces are recovered (missing).
Boundary recovery seconds: 0.01
Segment recovery seconds: 0.006
Facet recovery seconds: 0.004
Removing exterior tetrahedra ...
Spreading region attributes.
Found 1 domain.
Exterior tets removal seconds: 0.006
Recovering Delaunayness...
Initial obj = 1144577110755.3479
Final obj = 1144577101956.8596
Delaunay recovery seconds: 0.002
Refining mesh...
Min radiu-edge ratio = 1.
Min dihedral angle = 0.
Splitting bad quality tets.
Added 5765 (0,0,5765) Steiner points.
Performed 2 flips.
Refinement seconds: 0.129
Optimizing mesh...
Optimization level = 2.
Optimization scheme = 7.
Number of iteration = 3.
Min_Max dihed angle = 165.
Removed 558 edges.
Optimization seconds: 0.017
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.1.node.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.1.ele.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.1.face.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\anyBody_FEMUR.1.edge.
Output seconds: 0.133
Total running seconds: 0.317
Statistics:
Input points: 2960
Input facets: 5916
Input segments: 8874
Input holes: 0
Input regions: 1
Mesh points: 8725
Mesh tetrahedra: 44809
Mesh faces: 92576
Mesh faces on exterior boundary: 5916
Mesh faces on input facets: 5916
Mesh edges on input segments: 8874
Steiner points inside domain: 5765
Mesh quality statistics:
Smallest volume: 0.72062 | Largest volume: 89.37
Shortest edge: 1.9158 | Longest edge: 11.878
Smallest asp.ratio: 1.2386 | Largest asp.ratio: 17.937
Smallest facangle: 11.701 | Largest facangle: 154.2220
Smallest dihedral: 5.7235 | Largest dihedral: 172.3646
Aspect ratio histogram:
< 1.5 : 1197 | 6 - 10 : 645
1.5 - 2 : 15650 | 10 - 15 : 41
2 - 2.5 : 16692 | 15 - 25 : 5
2.5 - 3 : 6230 | 25 - 50 : 0
3 - 4 : 2997 | 50 - 100 : 0
4 - 6 : 1352 | 100 - : 0
(A tetrahedron's aspect ratio is its longest edge length divided by its
smallest side height)
Face angle histogram:
0 - 10 degrees: 0 | 90 - 100 degrees: 9964
10 - 20 degrees: 17 | 100 - 110 degrees: 3421
20 - 30 degrees: 1236 | 110 - 120 degrees: 625
30 - 40 degrees: 24445 | 120 - 130 degrees: 80
40 - 50 degrees: 58962 | 130 - 140 degrees: 15
50 - 60 degrees: 65267 | 140 - 150 degrees: 2
60 - 70 degrees: 57846 | 150 - 160 degrees: 1
70 - 80 degrees: 34511 | 160 - 170 degrees: 0
80 - 90 degrees: 21336 | 170 - 180 degrees: 0
Dihedral angle histogram:
0 - 5 degrees: 0 | 80 - 110 degrees: 59006
5 - 10 degrees: 125 | 110 - 120 degrees: 8350
10 - 20 degrees: 3664 | 120 - 130 degrees: 4973
20 - 30 degrees: 6987 | 130 - 140 degrees: 3275
30 - 40 degrees: 15602 | 140 - 150 degrees: 1996
40 - 50 degrees: 32655 | 150 - 160 degrees: 1477
50 - 60 degrees: 47035 | 160 - 170 degrees: 541
60 - 70 degrees: 47629 | 170 - 175 degrees: 1
70 - 80 degrees: 35538 | 175 - 180 degrees: 0
Minimum input dihedral angle is 130.66 (degree).
Memory usage statistics:
Maximum number of tetrahedra: 51254
Maximum number of tet blocks (blocksize = 8188): 7
Approximate memory for tetrahedral mesh (bytes): 11,400,736
Approximate memory for extra pointers (bytes): 1,715,408
Approximate memory for algorithms (bytes): 3,483,728
Approximate memory for working arrays (bytes): 1,371,088
Approximate total used memory (bytes): 17,970,960
--- Done --- 19-Dec-2017 15:54:36
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 15:54:36
--- Done --- 19-Dec-2017 15:54:36
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:54:41
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining node loads
----> Adding nodal loads
----> Adding nodal loads
----> Adding nodal loads
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_AnyBody_force_analysys (line 397)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:54:46
testGibbon -> Test file:2 of 59 DEMO_FEBio_XML_import.m
loadPath =
'E:\MainWork\WIP\GIBBON\data\FEB'
modelName =
'E:\MainWork\WIP\GIBBON\data\FEB\tempModel.feb'
testGibbon -> Test file:3 of 59 DEMO_FEBio_XML_replacing_node_field.m
Adding Geometry level
----> Adding node field
9.0579194e-01, 9.6488854e-01, 9.1573553e-01
1.2698682e-01, 1.5761308e-01, 7.9220733e-01
9.1337586e-01, 9.7059278e-01, 9.5949243e-01
6.3235925e-01, 9.5716695e-01, 6.5574070e-01
9.7540405e-02, 4.8537565e-01, 3.5711679e-02
2.7849822e-01, 8.0028047e-01, 8.4912931e-01
5.4688152e-01, 1.4188634e-01, 9.3399325e-01
9.5750684e-01, 4.2176128e-01, 6.7873515e-01
7.5774013e-01, 3.1709948e-01, 7.5468668e-01
7.4313247e-01, 9.5022205e-01, 2.7602508e-01
3.9222702e-01, 3.4446081e-02, 6.7970268e-01
6.5547789e-01, 4.3874436e-01, 6.5509800e-01
1.7118669e-01, 3.8155846e-01, 1.6261174e-01
7.0604609e-01, 7.6551679e-01, 1.1899768e-01
3.1832846e-02, 7.9519990e-01, 4.9836405e-01
2.7692298e-01, 1.8687260e-01, 9.5974396e-01
4.6171391e-02, 4.8976440e-01, 3.4038573e-01
9.7131781e-02, 4.4558620e-01, 5.8526775e-01
8.2345783e-01, 6.4631301e-01, 2.2381194e-01
6.9482862e-01, 7.0936483e-01, 7.5126706e-01
testGibbon -> Test file:4 of 59 DEMO_FEBio_active_contraction_01.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:54:49
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_active_contraction_01 (line 248)
In run (line 91)
In testGibbon (line 72)]
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_active_contraction_01 (line 248)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:54:49
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:54:49
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:54:49
------- converged at time : 0.0125
------- converged at time : 0.0275
------- converged at time : 0.0435
------- converged at time : 0.0599
------- converged at time : 0.0730338
------- converged at time : 0.0882873
------- converged at time : 0.104389
------- converged at time : 0.120829
------- converged at time : 0.137406
------- converged at time : 0.170667
------- converged at time : 0.207538
------- converged at time : 0.242693
------- converged at time : 0.277849
------- converged at time : 0.320658
------- converged at time : 0.361476
------- converged at time : 0.41413
------- converged at time : 0.476254
------- converged at time : 0.545952
------- converged at time : 0.621711
------- converged at time : 0.702318
------- converged at time : 0.786804
------- converged at time : 0.874393
------- converged at time : 0.964463
------- converged at time : 1
--- Done --- 19-Dec-2017 15:54:52
testGibbon -> Test file:5 of 59 DEMO_FEBio_active_responsive_interface.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 15:54:55
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 15:54:55
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 15:54:55
--- Running TetGen to mesh input boundary--- 19-Dec-2017 15:54:55
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
Delaunizing vertices...
Delaunay seconds: 0.012
Creating surface mesh ...
Surface mesh seconds: 0.002
Recovering boundaries...
Boundary recovery seconds: 0.003
Removing exterior tetrahedra ...
Spreading region attributes.
Exterior tets removal seconds: 0.002
Recovering Delaunayness...
Delaunay recovery seconds: 0.001
Refining mesh...
Refinement seconds: 0.06
Optimizing mesh...
Optimization seconds: 0.009
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.node.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.ele.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.face.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.edge.
Output seconds: 0.085
Total running seconds: 0.174
Statistics:
Input points: 1597
Input facets: 3268
Input segments: 4865
Input holes: 0
Input regions: 2
Mesh points: 4877
Mesh tetrahedra: 26273
Mesh faces: 54032
Mesh faces on exterior boundary: 2972
Mesh faces on input facets: 3268
Mesh edges on input segments: 4865
Steiner points inside domain: 3280
--- Done --- 19-Dec-2017 15:54:55
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 15:54:55
--- Done --- 19-Dec-2017 15:54:55
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:54:57
Adding Module level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding tet4 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_active_responsive_interface (line 549)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:55:13
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:55:13
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:55:15
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
------- converged at time : 1.05
------- converged at time : 1.1
------- converged at time : 1.15
------- converged at time : 1.2
------- converged at time : 1.25
------- converged at time : 1.3
------- converged at time : 1.35
------- converged at time : 1.4
------- converged at time : 1.45
------- converged at time : 1.5
------- converged at time : 1.55
------- converged at time : 1.6
------- converged at time : 1.65
------- converged at time : 1.7
------- converged at time : 1.75
------- converged at time : 1.8
------- converged at time : 1.85
------- converged at time : 1.9
------- converged at time : 1.95
------- converged at time : 2
------- converged at time : 2.05
------- converged at time : 2.1
------- converged at time : 2.15
------- converged at time : 2.2
------- converged at time : 2.25
------- converged at time : 2.3
------- converged at time : 2.35
------- converged at time : 2.4
------- converged at time : 2.45
------- converged at time : 2.5
------- converged at time : 2.55
------- converged at time : 2.6
------- converged at time : 2.65
------- converged at time : 2.7
------- converged at time : 2.75
------- converged at time : 2.8
------- converged at time : 2.85
------- converged at time : 2.9
------- converged at time : 2.95
------- converged at time : 3
--- Done --- 19-Dec-2017 15:55:43
testGibbon -> Test file:6 of 59 DEMO_FEBio_bar_force.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:55:54
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining node loads
----> Adding nodal loads
----> Adding nodal loads
----> Adding nodal loads
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:55:54
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:55:54
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:55:54
------- converged at time : 0.1
------- converged at time : 0.170714
------- converged at time : 0.22662
------- converged at time : 0.273871
------- converged at time : 0.313806
------- converged at time : 0.350263
------- converged at time : 0.383545
------- converged at time : 0.413928
------- converged at time : 0.441664
------- converged at time : 0.466984
------- converged at time : 0.490099
------- converged at time : 0.513215
------- converged at time : 0.53633
------- converged at time : 0.559445
------- converged at time : 0.58256
------- converged at time : 0.605675
------- converged at time : 0.628791
------- converged at time : 0.651906
------- converged at time : 0.675021
------- converged at time : 0.698136
------- converged at time : 0.721251
------- converged at time : 0.744367
------- converged at time : 0.767482
------- converged at time : 0.790597
------- converged at time : 0.813712
------- converged at time : 0.836828
------- converged at time : 0.859943
------- converged at time : 0.883058
------- converged at time : 0.906173
------- converged at time : 0.929288
------- converged at time : 0.952404
------- converged at time : 0.975519
------- converged at time : 0.998634
------- converged at time : 1
--- Done --- 19-Dec-2017 15:55:59
testGibbon -> Test file:7 of 59 DEMO_FEBio_bar_soft_sphere_indentation.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:56:03
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding hex8 element entries....
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding Contact field
----> Defining contact
----> Setting contact parameters
----> Defining contact surface pair
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_bar_soft_sphere_indentation (line 304)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:56:04
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:56:04
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:56:04
------- converged at time : 0.04
------- converged at time : 0.08
------- converged at time : 0.12
------- converged at time : 0.16
------- converged at time : 0.2
------- converged at time : 0.24
------- converged at time : 0.28
------- converged at time : 0.32
------- converged at time : 0.36
------- converged at time : 0.4
------- converged at time : 0.44
------- converged at time : 0.48
------- converged at time : 0.52
------- converged at time : 0.56
------- converged at time : 0.6
------- converged at time : 0.64
------- converged at time : 0.68
------- converged at time : 0.72
------- converged at time : 0.76
------- converged at time : 0.8
------- converged at time : 0.84
------- converged at time : 0.88
------- converged at time : 0.92
------- converged at time : 0.96
------- converged at time : 1
--- Done --- 19-Dec-2017 15:56:19
testGibbon -> Test file:8 of 59 DEMO_FEBio_bar_sphere_indentation.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:56:23
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding tri3 element entries....
----> Adding element data field
----> Thickness data entries found
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Contact field
----> Defining contact
----> Setting contact parameters
----> Defining contact surface pair
Adding Constraints level
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_bar_sphere_indentation (line 277)
In run (line 91)
In testGibbon (line 72)]
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_bar_sphere_indentation (line 277)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:56:25
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:56:25
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:56:25
------- converged at time : 0.04
------- converged at time : 0.08
------- converged at time : 0.12
------- converged at time : 0.16
------- converged at time : 0.2
------- converged at time : 0.24
------- converged at time : 0.28
------- converged at time : 0.32
------- converged at time : 0.36
------- converged at time : 0.4
------- converged at time : 0.44
------- converged at time : 0.48
------- converged at time : 0.52
------- converged at time : 0.56
------- converged at time : 0.6
------- converged at time : 0.64
------- converged at time : 0.68
------- converged at time : 0.72
------- converged at time : 0.76
------- converged at time : 0.8
------- converged at time : 0.84
------- converged at time : 0.88
------- converged at time : 0.92
------- converged at time : 0.96
------- converged at time : 1
--- Done --- 19-Dec-2017 15:57:05
testGibbon -> Test file:9 of 59 DEMO_FEBio_bar_sphere_indentation_multi_generation.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:57:11
Adding Module level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding tri3 element entries....
----> Adding element data field
----> Thickness data entries found
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Contact field
----> Defining contact
----> Setting contact parameters
----> Defining contact surface pair
Adding Constraints level
Adding LoadData level
----> Defining load curves
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_bar_sphere_indentation_multi_generation (line 292)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:57:12
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:57:12
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:57:12
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
------- converged at time : 1.05
------- converged at time : 1.1
------- converged at time : 1.15
------- converged at time : 1.2
------- converged at time : 1.25
------- converged at time : 1.3
------- converged at time : 1.35
------- converged at time : 1.4
------- converged at time : 1.45
------- converged at time : 1.5
------- converged at time : 1.55
------- converged at time : 1.6
------- converged at time : 1.65
------- converged at time : 1.7
------- converged at time : 1.75
------- converged at time : 1.8
------- converged at time : 1.85
------- converged at time : 1.9
------- converged at time : 1.95
------- converged at time : 2
--- Done --- 19-Dec-2017 15:57:22
testGibbon -> Test file:10 of 59 DEMO_FEBio_bar_sphere_indentation_multi_step.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:57:27
Adding Module level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding tri3 element entries....
----> Adding element data field
----> Thickness data entries found
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Constraints level
Adding LoadData level
----> Defining load curves
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Contact field
----> Defining contact
----> Setting contact parameters
----> Defining contact surface pair
----> Adding Control field
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_bar_sphere_indentation_multi_step (line 284)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:57:28
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:57:28
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:57:28
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
------- converged at time : 1.1
------- converged at time : 1.2
------- converged at time : 1.3
------- converged at time : 1.4
------- converged at time : 1.5
------- converged at time : 1.6
------- converged at time : 1.7
------- converged at time : 1.8
------- converged at time : 1.9
------- converged at time : 2
------- converged at time : 2.05
------- converged at time : 2.1
------- converged at time : 2.15
------- converged at time : 2.2
------- converged at time : 2.25
------- converged at time : 2.3
------- converged at time : 2.35
------- converged at time : 2.4
------- converged at time : 2.45
------- converged at time : 2.5
------- converged at time : 2.55
------- converged at time : 2.6
------- converged at time : 2.65
------- converged at time : 2.68955
------- converged at time : 2.73033
------- converged at time : 2.76482
------- converged at time : 2.7963
------- converged at time : 2.82998
------- converged at time : 2.86365
------- converged at time : 2.89732
------- converged at time : 2.92807
------- converged at time : 2.95882
------- converged at time : 2.99184
------- converged at time : 3
--- Done --- 19-Dec-2017 15:57:34
testGibbon -> Test file:11 of 59 DEMO_FEBio_bar_twist.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:57:37
Adding Module level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:57:40
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:57:40
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:57:41
------- converged at time : 1
------- converged at time : 2
------- converged at time : 3
------- converged at time : 4
------- converged at time : 5
------- converged at time : 6
------- converged at time : 7
------- converged at time : 8
------- converged at time : 9
------- converged at time : 10
------- converged at time : 11
------- converged at time : 12
------- converged at time : 13
------- converged at time : 14
------- converged at time : 15
------- converged at time : 16
------- converged at time : 17
------- converged at time : 18
------- converged at time : 19
------- converged at time : 20
------- converged at time : 21
------- converged at time : 22
------- converged at time : 23
------- converged at time : 24
------- converged at time : 25
------- converged at time : 26
------- converged at time : 27
------- converged at time : 28
------- converged at time : 29
------- converged at time : 30
------- converged at time : 31
------- converged at time : 32
------- converged at time : 33
------- converged at time : 34
------- converged at time : 35
------- converged at time : 36
------- converged at time : 37
------- converged at time : 38
------- converged at time : 39
------- converged at time : 40
------- converged at time : 41
------- converged at time : 42
------- converged at time : 43
------- converged at time : 44
------- converged at time : 45
------- converged at time : 46
------- converged at time : 47
------- converged at time : 48
------- converged at time : 49
------- converged at time : 50
--- Done --- 19-Dec-2017 15:57:48
testGibbon -> Test file:12 of 59 DEMO_FEBio_beam_L_force.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:57:52
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining node loads
----> Adding nodal loads
----> Adding nodal loads
----> Adding nodal loads
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:57:52
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:57:52
Waiting for log file...
[Warning: --- FAILED: Log file was not created in time.
FEBio likely failed prior to logfile creation! ---
19-Dec-2017 15:57:55]
[> In runMonitorFEBio (line 157)
In DEMO_FEBio_beam_L_force (line 357)
In run (line 91)
In testGibbon (line 72)]
[Warning: Try setting FEBioRunStruct.runMode to "internal"
to see potential errors prior to log file creation]
[> In runMonitorFEBio (line 159)
In DEMO_FEBio_beam_L_force (line 357)
In run (line 91)
In testGibbon (line 72)]
--- Failed or ended! --- 19-Dec-2017 15:57:55
testGibbon -> Test file:13 of 59 DEMO_FEBio_beam_bending.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:57:56
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining surface loads
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_beam_bending (line 176)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:57:56
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:57:56
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:57:57
------- converged at time : 0.1
------- converged at time : 0.179059
------- converged at time : 0.245878
------- converged at time : 0.302351
------- converged at time : 0.350082
------- converged at time : 0.393654
------- converged at time : 0.433431
------- converged at time : 0.469744
------- converged at time : 0.502893
------- converged at time : 0.533155
------- converged at time : 0.563416
------- converged at time : 0.593678
------- converged at time : 0.62394
------- converged at time : 0.654202
------- converged at time : 0.684464
------- converged at time : 0.714725
------- converged at time : 0.744987
------- converged at time : 0.775249
------- converged at time : 0.805511
------- converged at time : 0.835773
------- converged at time : 0.866034
------- converged at time : 0.896296
------- converged at time : 0.926558
------- converged at time : 0.95682
------- converged at time : 0.987082
------- converged at time : 1
--- Done --- 19-Dec-2017 15:58:00
testGibbon -> Test file:14 of 59 DEMO_FEBio_block_biaxial_loading_stiffness_analysis.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:02
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:58:02
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:02
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:02
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
--- Done --- 19-Dec-2017 15:58:03
testGibbon -> Test file:15 of 59 DEMO_FEBio_block_tension_compression_shear.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:06
Adding Module level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:58:07
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:07
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:07
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
------- converged at time : 1.05
------- converged at time : 1.1
------- converged at time : 1.15
------- converged at time : 1.2
------- converged at time : 1.25
------- converged at time : 1.3
------- converged at time : 1.35
------- converged at time : 1.4
------- converged at time : 1.45
------- converged at time : 1.5
------- converged at time : 1.55
------- converged at time : 1.6
------- converged at time : 1.65
------- converged at time : 1.7
------- converged at time : 1.75
------- converged at time : 1.8
------- converged at time : 1.85
------- converged at time : 1.9
------- converged at time : 1.95
------- converged at time : 2
------- converged at time : 2.05
------- converged at time : 2.1
------- converged at time : 2.15
------- converged at time : 2.2
------- converged at time : 2.25
------- converged at time : 2.3
------- converged at time : 2.35
------- converged at time : 2.4
------- converged at time : 2.45
------- converged at time : 2.5
------- converged at time : 2.55
------- converged at time : 2.6
------- converged at time : 2.65
------- converged at time : 2.7
------- converged at time : 2.75
------- converged at time : 2.8
------- converged at time : 2.85
------- converged at time : 2.9
------- converged at time : 2.95
------- converged at time : 3
------- converged at time : 3.05
------- converged at time : 3.1
------- converged at time : 3.15
------- converged at time : 3.2
------- converged at time : 3.25
------- converged at time : 3.3
------- converged at time : 3.35
------- converged at time : 3.4
------- converged at time : 3.45
------- converged at time : 3.5
------- converged at time : 3.55
------- converged at time : 3.6
------- converged at time : 3.65
------- converged at time : 3.7
------- converged at time : 3.75
------- converged at time : 3.8
------- converged at time : 3.85
------- converged at time : 3.9
------- converged at time : 3.95
------- converged at time : 4
------- converged at time : 4.05
------- converged at time : 4.1
------- converged at time : 4.15
------- converged at time : 4.2
------- converged at time : 4.25
------- converged at time : 4.3
------- converged at time : 4.35
------- converged at time : 4.4
------- converged at time : 4.45
------- converged at time : 4.5
------- converged at time : 4.55
------- converged at time : 4.6
------- converged at time : 4.65
------- converged at time : 4.7
------- converged at time : 4.75
------- converged at time : 4.8
------- converged at time : 4.85
------- converged at time : 4.9
------- converged at time : 4.95
------- converged at time : 5
--- Done --- 19-Dec-2017 15:58:09
testGibbon -> Test file:16 of 59 DEMO_FEBio_block_uniaxial_compression.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:14
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:58:15
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:15
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:15
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
--- Done --- 19-Dec-2017 15:58:15
testGibbon -> Test file:17 of 59 DEMO_FEBio_block_uniaxial_compression_biphasic_ramp_hold.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:17
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:58:17
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:17
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:17
------- converged at time : 0.001
------- converged at time : 0.006
------- converged at time : 0.031
------- converged at time : 0.153
------- converged at time : 0.3526
------- converged at time : 0.61428
------- converged at time : 0.925624
------- converged at time : 1.2767
------- converged at time : 1.65956
------- converged at time : 2.06785
------- converged at time : 2.49648
------- converged at time : 2.94138
------- converged at time : 3.39931
------- converged at time : 3.86764
------- converged at time : 4.34432
------- converged at time : 4.82765
------- converged at time : 5.1
--- Done --- 19-Dec-2017 15:58:19
testGibbon -> Test file:18 of 59 DEMO_FEBio_block_uniaxial_compression_fibre_reinforced.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:21
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:58:21
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:21
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:21
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.81
------- converged at time : 0.878
------- converged at time : 0.9152
------- converged at time : 0.96496
------- converged at time : 1
--- Done --- 19-Dec-2017 15:58:22
testGibbon -> Test file:19 of 59 DEMO_FEBio_block_uniaxial_compression_stiffness_analysis.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:24
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:58:24
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:24
===========================================================================
________ _________ _________ __ _________
| |\ | |\ | |\ | |\ / \\
| ____|| | ____|| | __ || |__|| | ___ ||
| |\___\| | |\___\| | |\_| || \_\| | // \ ||
| || | || | || | || __ | || | ||
| ||__ | ||__ | ||_| || | |\ | || | ||
| |\ | |\ | \\ | || | || | ||
| ___|| | ___|| | ___ || | || | || | ||
| |\__\| | |\__\| | |\__| || | || | || | ||
| || | || | || | || | || | || | ||
| || | ||___ | ||__| || | || | \\__/ ||
| || | |\ | || | || | ||
|___|| |________|| |__________|| |__|| \_________//
F I N I T E E L E M E N T S F O R B I O M E C H A N I C S
--- v e r s i o n - 2 . 6 . 4 . 9570 ---
Musculoskeletal Research Laboratory
University of Utah
http://febio.org
FEBio is a registered trademark.
copyright (c) 2006-2016 - All rights reserved
This is the NON-COMMERCIAL version of FEBio. This version may only be
used for non-commercial purposes as described in the license agreement.
To obtain a valid commercial license file, please contact the developers.
===========================================================================
Reading file E:\MainWork\WIP\GIBBON\data\temp\tempModel.feb ...SUCCESS!
===== beginning time step 1 : 0.05 =====
===== reforming stiffness matrix:
Nr of equations ........................... : 540
Nr of nonzeroes in stiffness matrix ....... : 14670
1
Nonlinear solution status: time= 0.05
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.405772e-002 1.694621e-007 0.000000e+000
energy 1.158355e-001 2.329965e-004 1.158355e-003
displacement 1.794046e+000 1.794046e+000 1.794046e-006
2
Nonlinear solution status: time= 0.05
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.405772e-002 2.852070e-011 0.000000e+000
energy 1.158355e-001 2.760949e-008 1.158355e-003
displacement 1.794046e+000 1.015945e-004 1.812461e-006
3
Nonlinear solution status: time= 0.05
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.405772e-002 7.672419e-015 0.000000e+000
energy 1.158355e-001 1.172343e-012 1.158355e-003
displacement 1.794046e+000 1.233895e-008 1.812620e-006
------- converged at time : 0.05
===== beginning time step 2 : 0.1 =====
1
Nonlinear solution status: time= 0.1
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.545239e-002 1.769814e-007 0.000000e+000
energy 1.195577e-001 2.434871e-004 1.195577e-003
displacement 1.831645e+000 1.831645e+000 1.831645e-006
2
Nonlinear solution status: time= 0.1
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.545239e-002 3.104208e-011 0.000000e+000
energy 1.195577e-001 2.970010e-008 1.195577e-003
displacement 1.831645e+000 1.092374e-004 1.851171e-006
3
Nonlinear solution status: time= 0.1
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.545239e-002 8.923045e-015 0.000000e+000
energy 1.195577e-001 1.298660e-012 1.195577e-003
displacement 1.831645e+000 1.365326e-008 1.851345e-006
------- converged at time : 0.1
===== beginning time step 3 : 0.15 =====
1
Nonlinear solution status: time= 0.15
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.696082e-002 1.849460e-007 0.000000e+000
energy 1.234616e-001 2.546134e-004 1.234616e-003
displacement 1.871525e+000 1.871525e+000 1.871525e-006
2
Nonlinear solution status: time= 0.15
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.696082e-002 3.384301e-011 0.000000e+000
energy 1.234616e-001 3.198174e-008 1.234616e-003
displacement 1.871525e+000 1.175765e-004 1.892248e-006
3
Nonlinear solution status: time= 0.15
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.696082e-002 1.040918e-014 0.000000e+000
energy 1.234616e-001 1.442279e-012 1.234616e-003
displacement 1.871525e+000 1.513164e-008 1.892437e-006
------- converged at time : 0.15
===== beginning time step 4 : 0.2 =====
1
Nonlinear solution status: time= 0.2
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.859466e-002 1.933890e-007 0.000000e+000
energy 1.275594e-001 2.664172e-004 1.275594e-003
displacement 1.913866e+000 1.913866e+000 1.913866e-006
2
Nonlinear solution status: time= 0.2
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.859466e-002 3.695843e-011 0.000000e+000
energy 1.275594e-001 3.447517e-008 1.275594e-003
displacement 1.913866e+000 1.266866e-004 1.935878e-006
3
Nonlinear solution status: time= 0.2
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 2.859466e-002 1.217250e-014 0.000000e+000
energy 1.275594e-001 1.604277e-012 1.275594e-003
displacement 1.913866e+000 1.679625e-008 1.936084e-006
------- converged at time : 0.2
===== beginning time step 5 : 0.25 =====
1
Nonlinear solution status: time= 0.25
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.036691e-002 2.023464e-007 0.000000e+000
energy 1.318642e-001 2.789501e-004 1.318642e-003
displacement 1.958859e+000 1.958859e+000 1.958859e-006
2
Nonlinear solution status: time= 0.25
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.036691e-002 4.043084e-011 0.000000e+000
energy 1.318642e-001 3.720349e-008 1.318642e-003
displacement 1.958859e+000 1.366517e-004 1.982260e-006
3
Nonlinear solution status: time= 0.25
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.036691e-002 1.427036e-014 0.000000e+000
energy 1.318642e-001 1.787337e-012 1.318642e-003
displacement 1.958859e+000 1.867383e-008 1.982485e-006
------- converged at time : 0.25
===== beginning time step 6 : 0.3 =====
1
Nonlinear solution status: time= 0.3
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.229221e-002 2.118574e-007 0.000000e+000
energy 1.363904e-001 2.922687e-004 1.363904e-003
displacement 2.006712e+000 2.006712e+000 2.006712e-006
2
Nonlinear solution status: time= 0.3
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.229221e-002 4.430947e-011 0.000000e+000
energy 1.363904e-001 4.019268e-008 1.363904e-003
displacement 2.006712e+000 1.475660e-004 2.031613e-006
3
Nonlinear solution status: time= 0.3
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.229221e-002 1.677323e-014 0.000000e+000
energy 1.363904e-001 1.994578e-012 1.363904e-003
displacement 2.006712e+000 2.079545e-008 2.031859e-006
------- converged at time : 0.3
===== beginning time step 7 : 0.35 =====
1
Nonlinear solution status: time= 0.35
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.438704e-002 2.219646e-007 0.000000e+000
energy 1.411533e-001 3.064347e-004 1.411533e-003
displacement 2.057654e+000 2.057654e+000 2.057654e-006
2
Nonlinear solution status: time= 0.35
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.438704e-002 4.865151e-011 0.000000e+000
energy 1.411533e-001 4.347204e-008 1.411533e-003
displacement 2.057654e+000 1.595359e-004 2.084176e-006
3
Nonlinear solution status: time= 0.35
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.438704e-002 1.976791e-014 0.000000e+000
energy 1.411533e-001 2.229641e-012 1.411533e-003
displacement 2.057654e+000 2.319726e-008 2.084445e-006
------- converged at time : 0.35
===== beginning time step 8 : 0.4 =====
1
Nonlinear solution status: time= 0.4
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.667001e-002 2.327147e-007 0.000000e+000
energy 1.461700e-001 3.215155e-004 1.461700e-003
displacement 2.111936e+000 2.111936e+000 2.111936e-006
2
Nonlinear solution status: time= 0.4
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.667001e-002 5.352355e-011 0.000000e+000
energy 1.461700e-001 4.707466e-008 1.461700e-003
displacement 2.111936e+000 1.726814e-004 2.140212e-006
3
Nonlinear solution status: time= 0.4
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.667001e-002 2.336170e-014 0.000000e+000
energy 1.461700e-001 2.496782e-012 1.461700e-003
displacement 2.111936e+000 2.592144e-008 2.140506e-006
------- converged at time : 0.4
===== beginning time step 9 : 0.45 =====
1
Nonlinear solution status: time= 0.45
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.916219e-002 2.441588e-007 0.000000e+000
energy 1.514589e-001 3.375853e-004 1.514589e-003
displacement 2.169834e+000 2.169834e+000 2.169834e-006
2
Nonlinear solution status: time= 0.45
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.916219e-002 5.900339e-011 0.000000e+000
energy 1.514589e-001 5.103793e-008 1.514589e-003
displacement 2.169834e+000 1.871382e-004 2.200009e-006
3
Nonlinear solution status: time= 0.45
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 3.916219e-002 2.768770e-014 0.000000e+000
energy 1.514589e-001 2.800991e-012 1.514589e-003
displacement 2.169834e+000 2.901730e-008 2.200331e-006
------- converged at time : 0.45
===== beginning time step 10 : 0.5 =====
1
Nonlinear solution status: time= 0.5
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 4.188744e-002 2.563527e-007 0.000000e+000
energy 1.570401e-001 3.547252e-004 1.570401e-003
displacement 2.231649e+000 2.231649e+000 2.231649e-006
2
Nonlinear solution status: time= 0.5
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 4.188744e-002 6.518218e-011 0.000000e+000
energy 1.570401e-001 5.540426e-008 1.570401e-003
displacement 2.231649e+000 2.030602e-004 2.263883e-006
3
Nonlinear solution status: time= 0.5
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 4.188744e-002 3.291163e-014 0.000000e+000
energy 1.570401e-001 3.148132e-012 1.570401e-003
displacement 2.231649e+000 3.254261e-008 2.264236e-006
------- converged at time : 0.5
===== beginning time step 11 : 0.55 =====
1
Nonlinear solution status: time= 0.55
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 4.487292e-002 2.693576e-007 0.000000e+000
energy 1.629357e-001 3.730244e-004 1.629357e-003
displacement 2.297714e+000 2.297714e+000 2.297714e-006
2
Nonlinear solution status: time= 0.55
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 4.487292e-002 7.216704e-011 0.000000e+000
energy 1.629357e-001 6.022174e-008 1.629357e-003
displacement 2.297714e+000 2.206219e-004 2.332186e-006
3
Nonlinear solution status: time= 0.55
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 4.487292e-002 3.924055e-014 0.000000e+000
energy 1.629357e-001 3.545112e-012 1.629357e-003
displacement 2.297714e+000 3.656525e-008 2.332573e-006
------- converged at time : 0.55
===== beginning time step 12 : 0.6 =====
1
Nonlinear solution status: time= 0.6
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 4.814957e-002 2.832407e-007 0.000000e+000
energy 1.691699e-001 3.925811e-004 1.691699e-003
displacement 2.368399e+000 2.368399e+000 2.368399e-006
2
Nonlinear solution status: time= 0.6
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 4.814957e-002 8.008425e-011 0.000000e+000
energy 1.691699e-001 6.554509e-008 1.691699e-003
displacement 2.368399e+000 2.400215e-004 2.405302e-006
3
Nonlinear solution status: time= 0.6
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 4.814957e-002 4.693419e-014 0.000000e+000
energy 1.691699e-001 4.000089e-012 1.691699e-003
displacement 2.368399e+000 4.116512e-008 2.405727e-006
------- converged at time : 0.6
===== beginning time step 13 : 0.65 =====
1
Nonlinear solution status: time= 0.65
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 5.175274e-002 2.980757e-007 0.000000e+000
energy 1.757694e-001 4.135034e-004 1.757694e-003
displacement 2.444107e+000 2.444107e+000 2.444107e-006
2
Nonlinear solution status: time= 0.65
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 5.175274e-002 8.908316e-011 0.000000e+000
energy 1.757694e-001 7.143661e-008 1.757694e-003
displacement 2.444107e+000 2.614852e-004 2.483657e-006
3
Nonlinear solution status: time= 0.65
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 5.175274e-002 5.631962e-014 0.000000e+000
energy 1.757694e-001 4.522724e-012 1.757694e-003
displacement 2.444107e+000 4.643655e-008 2.484125e-006
------- converged at time : 0.65
===== beginning time step 14 : 0.7 =====
1
Nonlinear solution status: time= 0.7
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 5.572292e-002 3.139438e-007 0.000000e+000
energy 1.827634e-001 4.359103e-004 1.827634e-003
displacement 2.525288e+000 2.525288e+000 2.525288e-006
2
Nonlinear solution status: time= 0.7
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 5.572292e-002 9.934102e-011 0.000000e+000
energy 1.827634e-001 7.796745e-008 1.827634e-003
displacement 2.525288e+000 2.852707e-004 2.567725e-006
3
Nonlinear solution status: time= 0.7
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 5.572292e-002 6.781039e-014 0.000000e+000
energy 1.827634e-001 5.124491e-012 1.827634e-003
displacement 2.525288e+000 5.249119e-008 2.568239e-006
------- converged at time : 0.7
===== beginning time step 15 : 0.75 =====
1
Nonlinear solution status: time= 0.75
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 6.010664e-002 3.309343e-007 0.000000e+000
energy 1.901842e-001 4.599337e-004 1.901842e-003
displacement 2.612440e+000 2.612440e+000 2.612440e-006
2
Nonlinear solution status: time= 0.75
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 6.010664e-002 1.110689e-010 0.000000e+000
energy 1.901842e-001 8.521893e-008 1.901842e-003
displacement 2.612440e+000 3.116730e-004 2.658027e-006
3
Nonlinear solution status: time= 0.75
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 6.010664e-002 8.193161e-014 0.000000e+000
energy 1.901842e-001 5.819052e-012 1.901842e-003
displacement 2.612440e+000 5.946149e-008 2.658594e-006
------- converged at time : 0.75
===== beginning time step 16 : 0.8 =====
1
Nonlinear solution status: time= 0.8
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 6.495750e-002 3.491457e-007 0.000000e+000
energy 1.980676e-001 4.857192e-004 1.980676e-003
displacement 2.706113e+000 2.706113e+000 2.706113e-006
2
Nonlinear solution status: time= 0.8
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 6.495750e-002 1.245191e-010 0.000000e+000
energy 1.980676e-001 9.328426e-008 1.980676e-003
displacement 2.706113e+000 3.410299e-004 2.755145e-006
3
Nonlinear solution status: time= 0.8
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 6.495750e-002 9.935295e-014 0.000000e+000
energy 1.980676e-001 6.622725e-012 1.980676e-003
displacement 2.706113e+000 6.750507e-008 2.755770e-006
------- converged at time : 0.8
===== beginning time step 17 : 0.85 =====
1
Nonlinear solution status: time= 0.85
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 7.033743e-002 3.686867e-007 0.000000e+000
energy 2.064529e-001 5.134281e-004 2.064529e-003
displacement 2.806922e+000 2.806922e+000 2.806922e-006
2
Nonlinear solution status: time= 0.85
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 7.033743e-002 1.399941e-010 0.000000e+000
energy 2.064529e-001 1.022704e-007 2.064529e-003
displacement 2.806922e+000 3.737294e-004 2.859726e-006
3
Nonlinear solution status: time= 0.85
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 7.033743e-002 1.209323e-013 0.000000e+000
energy 2.064529e-001 7.555059e-012 2.064529e-003
displacement 2.806922e+000 7.680995e-008 2.860416e-006
------- converged at time : 0.85
===== beginning time step 18 : 0.9 =====
1
Nonlinear solution status: time= 0.9
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 7.631824e-002 3.896775e-007 0.000000e+000
energy 2.153841e-001 5.432393e-004 2.153841e-003
displacement 2.915548e+000 2.915548e+000 2.915548e-006
2
Nonlinear solution status: time= 0.9
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 7.631824e-002 1.578582e-010 0.000000e+000
energy 2.153841e-001 1.123006e-007 2.153841e-003
displacement 2.915548e+000 4.102178e-004 2.972488e-006
3
Nonlinear solution status: time= 0.9
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 7.631824e-002 1.477739e-013 0.000000e+000
energy 2.153841e-001 8.639543e-012 2.153841e-003
displacement 2.915548e+000 8.760113e-008 2.973252e-006
------- converged at time : 0.9
===== beginning time step 19 : 0.95 =====
1
Nonlinear solution status: time= 0.95
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 8.298344e-002 4.122509e-007 0.000000e+000
energy 2.249100e-001 5.753516e-004 2.249100e-003
displacement 3.032753e+000 3.032753e+000 3.032753e-006
2
Nonlinear solution status: time= 0.95
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 8.298344e-002 1.785516e-010 0.000000e+000
energy 2.249100e-001 1.235167e-007 2.249100e-003
displacement 3.032753e+000 4.510097e-004 3.094236e-006
3
Nonlinear solution status: time= 0.95
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 8.298344e-002 1.813057e-013 0.000000e+000
energy 2.249100e-001 9.904496e-012 2.249100e-003
displacement 3.032753e+000 1.001486e-007 3.095082e-006
------- converged at time : 0.95
MUST POINT CONTROLLER: adjusting time step. dt = 0.05
===== beginning time step 20 : 1 =====
1
Nonlinear solution status: time= 1
stiffness updates = 0
right hand side evaluations = 2
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 9.043048e-002 4.365542e-007 0.000000e+000
energy 2.350849e-001 6.099863e-004 2.350849e-003
displacement 3.159388e+000 3.159388e+000 3.159388e-006
2
Nonlinear solution status: time= 1
stiffness updates = 1
right hand side evaluations = 3
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 9.043048e-002 2.026086e-010 0.000000e+000
energy 2.350849e-001 1.360827e-007 2.350849e-003
displacement 3.159388e+000 4.966996e-004 3.225870e-006
3
Nonlinear solution status: time= 1
stiffness updates = 2
right hand side evaluations = 4
stiffness matrix reformations = 1
step from line search = 1.000000
convergence norms : INITIAL CURRENT REQUIRED
residual 9.043048e-002 2.233837e-013 0.000000e+000
energy 2.350849e-001 1.138417e-011 2.350849e-003
displacement 3.159388e+000 1.147772e-007 3.226808e-006
------- converged at time : 1
N O N L I N E A R I T E R A T I O N I N F O R M A T I O N
Number of time steps completed .................... : 20
Total number of equilibrium iterations ............ : 60
Average number of equilibrium iterations .......... : 3
Total number of right hand evaluations ............ : 80
Total number of stiffness reformations ............ : 20
Time in linear solver: 0:00:00
Elapsed time : 0:00:02
N O R M A L T E R M I N A T I O N
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:26
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
--- Done --- 19-Dec-2017 15:58:26
testGibbon -> Test file:20 of 59 DEMO_FEBio_block_uniaxial_compression_viscoelastic_load_unload.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:29
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
[Warning: Elastic field (containing material structure)
missing. Assuming "old" viscoelastic specification type.
It is recommended to update code.]
[> In addMaterialLevel_FEB (line 125)
In febStruct2febFile (line 65)
In DEMO_FEBio_block_uniaxial_compression_viscoelastic_load_unload (line 241)
In run (line 91)
In testGibbon (line 72)]
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_block_uniaxial_compression_viscoelastic_load_unload (line 241)
In run (line 91)
In testGibbon (line 72)]
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_block_uniaxial_compression_viscoelastic_load_unload (line 241)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:58:29
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:29
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:29
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
------- converged at time : 1.05
------- converged at time : 1.1
------- converged at time : 1.15
------- converged at time : 1.2
------- converged at time : 1.25
------- converged at time : 1.3
------- converged at time : 1.35
------- converged at time : 1.4
------- converged at time : 1.45
------- converged at time : 1.5
------- converged at time : 1.55
------- converged at time : 1.6
------- converged at time : 1.65
------- converged at time : 1.7
------- converged at time : 1.75
------- converged at time : 1.8
------- converged at time : 1.85
------- converged at time : 1.9
------- converged at time : 1.95
------- converged at time : 2
--- Done --- 19-Dec-2017 15:58:31
testGibbon -> Test file:21 of 59 DEMO_FEBio_block_uniaxial_compression_viscoelastic_ramp_hold.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:33
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
[Warning: Elastic field (containing material structure)
missing. Assuming "old" viscoelastic specification type.
It is recommended to update code.]
[> In addMaterialLevel_FEB (line 125)
In febStruct2febFile (line 65)
In DEMO_FEBio_block_uniaxial_compression_viscoelastic_ramp_hold (line 238)
In run (line 91)
In testGibbon (line 72)]
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_block_uniaxial_compression_viscoelastic_ramp_hold (line 238)
In run (line 91)
In testGibbon (line 72)]
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_block_uniaxial_compression_viscoelastic_ramp_hold (line 238)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:58:33
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:33
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:33
------- converged at time : 0.001
------- converged at time : 0.006
------- converged at time : 0.031
------- converged at time : 0.151
------- converged at time : 0.347
------- converged at time : 0.6038
------- converged at time : 0.90924
------- converged at time : 1.25359
------- converged at time : 1.62907
------- converged at time : 2.02946
------- converged at time : 2.44977
------- converged at time : 2.88601
------- converged at time : 3.33501
------- converged at time : 3.79421
------- converged at time : 4.26157
------- converged at time : 4.73545
------- converged at time : 5.21456
------- converged at time : 5.69785
------- converged at time : 6.18448
------- converged at time : 6.67378
------- converged at time : 7.16523
------- converged at time : 7.65838
------- converged at time : 8.15291
------- converged at time : 8.64852
------- converged at time : 9.14502
------- converged at time : 9.64222
------- converged at time : 10.14
------- converged at time : 10.6382
------- converged at time : 11.1367
------- converged at time : 11.6356
------- converged at time : 12.1347
------- converged at time : 12.6339
------- converged at time : 13.1334
------- converged at time : 13.6329
------- converged at time : 14.1325
------- converged at time : 14.6322
------- converged at time : 15.132
------- converged at time : 15.6318
------- converged at time : 16.1316
------- converged at time : 16.6315
------- converged at time : 17.1314
------- converged at time : 17.6313
------- converged at time : 18.1313
------- converged at time : 18.6312
------- converged at time : 19.1312
------- converged at time : 19.6311
------- converged at time : 20.1311
------- converged at time : 20.6311
------- converged at time : 21.1311
------- converged at time : 21.6311
------- converged at time : 22.131
------- converged at time : 22.631
------- converged at time : 23.131
------- converged at time : 23.631
------- converged at time : 24.131
------- converged at time : 24.631
------- converged at time : 25.131
------- converged at time : 25.631
------- converged at time : 26.131
------- converged at time : 26.631
------- converged at time : 27.131
------- converged at time : 27.631
------- converged at time : 28.131
------- converged at time : 28.631
------- converged at time : 29.131
------- converged at time : 29.631
------- converged at time : 30.131
------- converged at time : 30.631
------- converged at time : 31.131
------- converged at time : 31.631
------- converged at time : 32.131
------- converged at time : 32.631
------- converged at time : 33.131
------- converged at time : 33.631
------- converged at time : 34.131
------- converged at time : 34.631
------- converged at time : 35.131
------- converged at time : 35.631
------- converged at time : 36.131
------- converged at time : 36.631
------- converged at time : 37.131
------- converged at time : 37.631
------- converged at time : 38.131
------- converged at time : 38.631
------- converged at time : 39.131
------- converged at time : 39.631
------- converged at time : 40.131
------- converged at time : 40.631
------- converged at time : 41.131
------- converged at time : 41.631
------- converged at time : 42.131
------- converged at time : 42.631
------- converged at time : 43.131
------- converged at time : 43.631
------- converged at time : 44.131
------- converged at time : 44.631
------- converged at time : 45.131
------- converged at time : 45.631
------- converged at time : 46.131
------- converged at time : 46.631
------- converged at time : 47.131
------- converged at time : 47.631
------- converged at time : 48.131
------- converged at time : 48.631
------- converged at time : 49.131
------- converged at time : 49.631
------- converged at time : 50.131
------- converged at time : 50.631
------- converged at time : 51.131
------- converged at time : 51.631
------- converged at time : 52.131
------- converged at time : 52.631
------- converged at time : 53.131
------- converged at time : 53.631
------- converged at time : 54.131
------- converged at time : 54.631
------- converged at time : 55.131
------- converged at time : 55.631
------- converged at time : 56.131
------- converged at time : 56.631
------- converged at time : 57.131
------- converged at time : 57.631
------- converged at time : 58.131
------- converged at time : 58.631
------- converged at time : 59.131
------- converged at time : 59.631
------- converged at time : 60.131
------- converged at time : 60.631
------- converged at time : 61.131
------- converged at time : 61.631
------- converged at time : 62.131
------- converged at time : 62.631
------- converged at time : 63.131
------- converged at time : 63.631
------- converged at time : 64.131
------- converged at time : 64.631
------- converged at time : 65.131
------- converged at time : 65.631
------- converged at time : 66.131
------- converged at time : 66.631
------- converged at time : 67.131
------- converged at time : 67.631
------- converged at time : 68.131
------- converged at time : 68.631
------- converged at time : 69.131
------- converged at time : 69.631
------- converged at time : 70.131
------- converged at time : 70.631
------- converged at time : 71.131
------- converged at time : 71.631
------- converged at time : 72.131
------- converged at time : 72.631
------- converged at time : 73.131
------- converged at time : 73.631
------- converged at time : 74.131
------- converged at time : 74.631
------- converged at time : 75.131
------- converged at time : 75.631
------- converged at time : 76.131
------- converged at time : 76.631
------- converged at time : 77.131
------- converged at time : 77.631
------- converged at time : 78.131
------- converged at time : 78.631
------- converged at time : 79.131
------- converged at time : 79.631
------- converged at time : 80.131
------- converged at time : 80.631
------- converged at time : 81.131
------- converged at time : 81.631
------- converged at time : 82.131
------- converged at time : 82.631
------- converged at time : 83.131
------- converged at time : 83.631
------- converged at time : 84.131
------- converged at time : 84.631
------- converged at time : 85.131
------- converged at time : 85.631
------- converged at time : 86.131
------- converged at time : 86.631
------- converged at time : 87.131
------- converged at time : 87.631
------- converged at time : 88.131
------- converged at time : 88.631
------- converged at time : 89.131
------- converged at time : 89.631
------- converged at time : 90.131
------- converged at time : 90.631
------- converged at time : 91.131
------- converged at time : 91.631
------- converged at time : 92.131
------- converged at time : 92.631
------- converged at time : 93.131
------- converged at time : 93.631
------- converged at time : 94.131
------- converged at time : 94.631
------- converged at time : 95.131
------- converged at time : 95.631
------- converged at time : 96.131
------- converged at time : 96.631
------- converged at time : 97.131
------- converged at time : 97.631
------- converged at time : 98.131
------- converged at time : 98.631
------- converged at time : 99.131
------- converged at time : 99.631
------- converged at time : 100
--- Done --- 19-Dec-2017 15:58:36
testGibbon -> Test file:22 of 59 DEMO_FEBio_continuous_fibre_distribution.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:41
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_continuous_fibre_distribution (line 292)
In run (line 91)
In testGibbon (line 72)]
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_continuous_fibre_distribution (line 292)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:58:41
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:41
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:41
------- converged at time : 0.04
------- converged at time : 0.08
------- converged at time : 0.12
------- converged at time : 0.16
------- converged at time : 0.2
------- converged at time : 0.24
------- converged at time : 0.28
------- converged at time : 0.32
------- converged at time : 0.36
------- converged at time : 0.4
------- converged at time : 0.44
------- converged at time : 0.48
------- converged at time : 0.52
------- converged at time : 0.56
------- converged at time : 0.6
------- converged at time : 0.64
------- converged at time : 0.68
------- converged at time : 0.72
------- converged at time : 0.76
------- converged at time : 0.8
------- converged at time : 0.84
------- converged at time : 0.88
------- converged at time : 0.92
------- converged at time : 0.96
------- converged at time : 1
--- Done --- 19-Dec-2017 15:58:42
testGibbon -> Test file:23 of 59 DEMO_FEBio_cube_multi_generation.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:44
Adding Module level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:58:45
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:45
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:45
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
------- converged at time : 1.1
------- converged at time : 1.2
------- converged at time : 1.3
------- converged at time : 1.4
------- converged at time : 1.5
------- converged at time : 1.6
------- converged at time : 1.7
------- converged at time : 1.8
------- converged at time : 1.9
------- converged at time : 2
--- Done --- 19-Dec-2017 15:58:46
testGibbon -> Test file:24 of 59 DEMO_FEBio_cube_multi_step.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:49
Adding Module level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_cube_multi_step (line 223)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:58:49
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:49
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:50
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
------- converged at time : 1.05
------- converged at time : 1.1
------- converged at time : 1.15
------- converged at time : 1.2
------- converged at time : 1.25
------- converged at time : 1.3
------- converged at time : 1.35
------- converged at time : 1.4
------- converged at time : 1.45
------- converged at time : 1.5
------- converged at time : 1.55
------- converged at time : 1.6
------- converged at time : 1.65
------- converged at time : 1.7
------- converged at time : 1.75
------- converged at time : 1.8
------- converged at time : 1.85
------- converged at time : 1.9
------- converged at time : 1.95
------- converged at time : 2
--- Done --- 19-Dec-2017 15:58:51
testGibbon -> Test file:25 of 59 DEMO_FEBio_cube_tension.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:53
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:58:53
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:53
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:53
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
--- Done --- 19-Dec-2017 15:58:54
testGibbon -> Test file:26 of 59 DEMO_FEBio_cube_viscoelastic_aniso.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:58:55
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 15:58:55
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:58:55
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:58:55
------- converged at time : 0.001
------- converged at time : 0.006
------- converged at time : 0.02
------- converged at time : 0.0412
------- converged at time : 0.06816
------- converged at time : 0.099728
------- converged at time : 0.134982
------- converged at time : 0.173186
------- converged at time : 0.213749
------- converged at time : 0.256199
------- converged at time : 0.300159
------- converged at time : 0.345327
------- converged at time : 0.391462
------- converged at time : 0.43837
------- converged at time : 0.485896
------- converged at time : 0.533916
------- converged at time : 0.582333
------- converged at time : 0.631067
------- converged at time : 0.680053
------- converged at time : 0.729243
------- converged at time : 0.778594
------- converged at time : 0.828075
------- converged at time : 0.87766
------- converged at time : 0.927328
------- converged at time : 0.977063
------- converged at time : 1.02685
------- converged at time : 1.07668
------- converged at time : 1.12654
------- converged at time : 1.17644
------- converged at time : 1.22635
------- converged at time : 1.27628
------- converged at time : 1.32622
------- converged at time : 1.37618
------- converged at time : 1.42614
------- converged at time : 1.47611
------- converged at time : 1.52609
------- converged at time : 1.57607
------- converged at time : 1.62606
------- converged at time : 1.67605
------- converged at time : 1.72604
------- converged at time : 1.77603
------- converged at time : 1.82602
------- converged at time : 1.87602
------- converged at time : 1.92602
------- converged at time : 1.97601
------- converged at time : 2.02601
------- converged at time : 2.07601
------- converged at time : 2.12601
------- converged at time : 2.17601
------- converged at time : 2.226
------- converged at time : 2.276
------- converged at time : 2.326
------- converged at time : 2.376
------- converged at time : 2.426
------- converged at time : 2.476
------- converged at time : 2.526
------- converged at time : 2.576
------- converged at time : 2.626
------- converged at time : 2.676
------- converged at time : 2.726
------- converged at time : 2.776
------- converged at time : 2.826
------- converged at time : 2.876
------- converged at time : 2.926
------- converged at time : 2.976
------- converged at time : 3
--- Done --- 19-Dec-2017 15:58:57
testGibbon -> Test file:27 of 59 DEMO_FEBio_cylinder_embedded_indentor_01.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 15:58:59
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 15:58:59
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 15:59:00
--- Running TetGen to mesh input boundary--- 19-Dec-2017 15:59:00
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
Delaunizing vertices...
Delaunay seconds: 0.035
Creating surface mesh ...
Surface mesh seconds: 0.004
Recovering boundaries...
Boundary recovery seconds: 0.009
Removing exterior tetrahedra ...
Spreading region attributes.
Exterior tets removal seconds: 0.003
Suppressing Steiner points ...
Steiner suppression seconds: 0
Recovering Delaunayness...
Delaunay recovery seconds: 0.003
Refining mesh...
Refinement seconds: 0.1
Optimizing mesh...
Optimization seconds: 0.014
Jettisoning redundant points.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.node.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.ele.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.face.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.edge.
Output seconds: 0.154
Total running seconds: 0.322
Statistics:
Input points: 2664
Input facets: 5324
Input segments: 7986
Input holes: 0
Input regions: 1
Mesh points: 7794
Mesh tetrahedra: 40967
Mesh faces: 84596
Mesh faces on exterior boundary: 5324
Mesh faces on input facets: 5324
Mesh edges on input segments: 7986
Steiner points inside domain: 5130
--- Done --- 19-Dec-2017 15:59:00
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 15:59:00
--- Done --- 19-Dec-2017 15:59:00
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 15:59:03
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_cylinder_embedded_indentor_01 (line 349)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 15:59:08
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 15:59:08
Waiting for log file...
Proceeding to check log file...19-Dec-2017 15:59:08
------- converged at time : 0.025
------- converged at time : 0.05
------- converged at time : 0.075
------- converged at time : 0.1
------- converged at time : 0.125
------- converged at time : 0.15
------- converged at time : 0.175
------- converged at time : 0.2
------- converged at time : 0.225
------- converged at time : 0.25
------- converged at time : 0.275
------- converged at time : 0.3
------- converged at time : 0.325
------- converged at time : 0.35
------- converged at time : 0.375
------- converged at time : 0.4
------- converged at time : 0.425
------- converged at time : 0.45
------- converged at time : 0.475
------- converged at time : 0.5
------- converged at time : 0.525
------- converged at time : 0.55
------- converged at time : 0.575
------- converged at time : 0.6
------- converged at time : 0.625
------- converged at time : 0.65
------- converged at time : 0.675
------- converged at time : 0.7
------- converged at time : 0.725
------- converged at time : 0.75
------- converged at time : 0.775
------- converged at time : 0.8
------- converged at time : 0.825
------- converged at time : 0.85
------- converged at time : 0.875
------- converged at time : 0.9
------- converged at time : 0.925
------- converged at time : 0.95
------- converged at time : 0.975
------- converged at time : 1
--- Done --- 19-Dec-2017 16:00:09
testGibbon -> Test file:28 of 59 DEMO_FEBio_cylinder_spherical_head_indentor.m
[Warning: Some input points are not referenced by the
triangulation.]
[> In DEMO_FEBio_cylinder_spherical_head_indentor (line 191)
In run (line 91)
In testGibbon (line 72)]
[Warning: Some input points are not referenced by the
triangulation.]
[> In DEMO_FEBio_cylinder_spherical_head_indentor (line 191)
In run (line 91)
In testGibbon (line 72)]
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:00:20
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:00:20
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:00:20
--- Writing MTR file --- 19-Dec-2017 16:00:20
--- Running TetGen to mesh initial Delaunay tesselation using sizing function--- 19-Dec-2017 16:00:20
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.smesh.
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.mtr.
Cannot access file E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.b.node.
Delaunizing vertices...
Delaunay seconds: 0.003
Creating surface mesh ...
Surface mesh seconds: 0.001
Recovering boundaries...
Boundary recovery seconds: 0.001
Removing exterior tetrahedra ...
Spreading region attributes.
Exterior tets removal seconds: 0
Recovering Delaunayness...
Delaunay recovery seconds: 0
Refining mesh...
Refinement seconds: 0.024
Optimizing mesh...
Optimization seconds: 0.003
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.node.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.ele.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.face.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.edge.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.mtr.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel1.1.p2t.
Output seconds: 0.056
Total running seconds: 0.088
Statistics:
Input points: 398
Input facets: 792
Input segments: 1188
Input holes: 0
Input regions: 1
Mesh points: 1559
Mesh tetrahedra: 8477
Mesh faces: 17350
Mesh faces on exterior boundary: 792
Mesh faces on input facets: 792
Mesh edges on input segments: 1188
Steiner points inside domain: 1161
--- Done --- 19-Dec-2017 16:00:20
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:00:20
--- Done --- 19-Dec-2017 16:00:20
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:00:23
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet10 element entries....
----> Adding tri3 element entries....
----> Adding element data field
----> Thickness data entries found
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Contact field
----> Defining contact
----> Setting contact parameters
----> Defining contact surface pair
Adding Constraints level
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_cylinder_spherical_head_indentor (line 485)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:00:26
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:00:26
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:00:27
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
--- Done --- 19-Dec-2017 16:02:44
testGibbon -> Test file:29 of 59 DEMO_FEBio_disc_probe_indentation.m
[Warning: Some input points are not referenced by the
triangulation.]
[> In DEMO_FEBio_disc_probe_indentation (line 194)
In run (line 91)
In testGibbon (line 72)]
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:02:55
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:02:55
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:02:56
--- Writing MTR file --- 19-Dec-2017 16:02:56
--- Running TetGen to mesh initial Delaunay tesselation using sizing function--- 19-Dec-2017 16:02:56
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.mtr.
Cannot access file E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.b.node.
Delaunizing vertices...
Delaunay seconds: 0.004
Creating surface mesh ...
Surface mesh seconds: 0.001
Recovering boundaries...
Boundary recovery seconds: 0.001
Removing exterior tetrahedra ...
Spreading region attributes.
Exterior tets removal seconds: 0
Recovering Delaunayness...
Delaunay recovery seconds: 0.001
Refining mesh...
Refinement seconds: 0.026
Optimizing mesh...
Optimization seconds: 0.002
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.node.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.ele.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.face.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.edge.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.mtr.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.p2t.
Output seconds: 0.073
Total running seconds: 0.108
Statistics:
Input points: 522
Input facets: 1040
Input segments: 1560
Input holes: 0
Input regions: 1
Mesh points: 1750
Mesh tetrahedra: 9251
Mesh faces: 19022
Mesh faces on exterior boundary: 1040
Mesh faces on input facets: 1040
Mesh edges on input segments: 1560
Steiner points inside domain: 1228
--- Done --- 19-Dec-2017 16:02:56
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:02:56
--- Done --- 19-Dec-2017 16:02:56
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:02:56
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding tri3 element entries....
----> Adding element data field
----> Thickness data entries found
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Contact field
----> Defining contact
----> Setting contact parameters
----> Defining contact surface pair
Adding Constraints level
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_disc_probe_indentation (line 487)
In run (line 91)
In testGibbon (line 72)]
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_disc_probe_indentation (line 487)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:02:59
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:02:59
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:02:59
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:03:03
testGibbon -> Test file:30 of 59 DEMO_FEBio_hexLattice_compression.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:03:07
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:03:08
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:03:08
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:03:09
------- converged at time : 0.066667
------- converged at time : 0.133334
------- converged at time : 0.200001
------- converged at time : 0.266668
------- converged at time : 0.333335
------- converged at time : 0.400002
------- converged at time : 0.466669
------- converged at time : 0.533336
------- converged at time : 0.600003
------- converged at time : 0.66667
------- converged at time : 0.733337
------- converged at time : 0.800004
------- converged at time : 0.866671
------- converged at time : 0.933338
------- converged at time : 1.00001
--- Done --- 19-Dec-2017 16:03:19
testGibbon -> Test file:31 of 59 DEMO_FEBio_iFEA_uniaxial_01.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:03:26
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:03:26
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:03:26
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:03:26
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
--- Done --- 19-Dec-2017 16:03:27
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 1.0000000000000000e+00 1.0000000000000000e+00
Proposed : 6.4464428523599996e-04 3.0000000000000000e+00
Set (constr.) : 6.4464428523599996e-04 3.0000000000000000e+00
Done
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 1.0009999999999999e+00 1.0000000000000000e+00
Proposed : 6.4528892952123585e-04 3.0000000000000000e+00
Set (constr.) : 6.4584027880999404e-04 3.0000000000000000e+00
Done
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 1.0000000000000000e+00 1.0009999999999999e+00
Proposed : 6.4464428523599996e-04 3.0029999999999997e+00
Set (constr.) : 6.4464428523599996e-04 3.0055662191396384e+00
Done
First-Order Norm of
Iteration Func-count Residual optimality Lambda step
0 3 2.27193 11.4 0.01
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.3041473879874541e-01 1.4561599254748412e+00
Proposed : 4.7085768721875682e-04 4.3684797764245236e+00
Set (constr.) : 2.8577972810327716e-04 5.6280072751443626e+00
Done
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.3141473879874541e-01 1.4561599254748412e+00
Proposed : 4.7150233150399282e-04 4.3684797764245236e+00
Set (constr.) : 2.8695941985962373e-04 5.6280072751443626e+00
Done
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.3041473879874541e-01 1.4576160854003160e+00
Proposed : 4.7085768721875682e-04 4.3728482562009479e+00
Set (constr.) : 2.8577972810327716e-04 5.6366593919901105e+00
Done
1 6 0.172659 3.76 0.001 0.529866
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.6132954344893611e-01 1.5363473886746914e+00
Proposed : 4.9078673936568955e-04 4.6090421660240741e+00
Set (constr.) : 3.2364688187895438e-04 6.1067016392761619e+00
Done
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.6232954344893611e-01 1.5363473886746914e+00
Proposed : 4.9143138365092555e-04 4.6090421660240741e+00
Set (constr.) : 3.2491607244640339e-04 6.1067016392761619e+00
Done
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.6132954344893611e-01 1.5378837360633661e+00
Proposed : 4.9078673936568955e-04 4.6136512081900989e+00
Set (constr.) : 3.2364688187895438e-04 6.1159169971117562e+00
Done
2 9 0.0102599 0.372 0.0001 0.0859404
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.5994555545035858e-01 1.5252683224114449e+00
Proposed : 4.8989455941157137e-04 4.5758049672343351e+00
Set (constr.) : 3.2189453098547074e-04 6.0402949919581710e+00
Done
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.6094555545035858e-01 1.5252683224114449e+00
Proposed : 4.9053920369680737e-04 4.5758049672343351e+00
Set (constr.) : 3.2316020128959249e-04 6.0402949919581710e+00
Done
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.5994555545035858e-01 1.5267935907338563e+00
Proposed : 4.8989455941157137e-04 4.5803807722015693e+00
Set (constr.) : 3.2189453098547074e-04 6.0494322489954797e+00
Done
3 12 0.00897384 0.00371 1e-05 0.0111652
Local minimum possible.
lsqnonlin stopped because the relative size of the current step is less than
the selected value of the step size tolerance.
<stopping criteria details>
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 7.5994555545035858e-01 1.5252683224114449e+00
Proposed : 4.8989455941157137e-04 4.5758049672343351e+00
Set (constr.) : 3.2189453098547074e-04 6.0402949919581710e+00
Done
P_opt=3.2189453098547074e-04,6.0402949919581710e+00
testGibbon -> Test file:32 of 59 DEMO_FEBio_iFEA_uniaxial_transiso_01.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:03:44
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:03:44
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00
Proposed : 6.6182906450000002e-04 2.0000011857416000e+00 9.0604513499999997e-05 2.2995781822623371e+02 3.1728247084040002e+00
Set (constr.) : 6.6182906450000002e-04 2.0000011857416000e+00 9.0604513499999997e-05 2.2995781822623371e+02 3.1728247084040002e+00
Done
SETTING FIBRE DIRECTIONS...
----> Creating MatAxis entries
Done
SETTING FIBRE DIRECTIONS...
----> Creating MatAxis entries
Done
ans =
1.1952 1.1952 0.7000
1.1318 1.2620 0.7000
testGibbon -> Test file:33 of 59 DEMO_FEBio_iFEA_uniaxial_transiso_02.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:03:50
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:03:51
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00
Proposed : 3.0574999999999998e-04 2.0070000000000001e+00 9.0589999999999998e-05 2.3509999999999999e+02 3.2940000000000000e+00
Set (constr.) : 3.0574999999999998e-04 2.0070000000000001e+00 9.0589999999999998e-05 2.3509999999999999e+02 3.2940000000000000e+00
Done
SETTING FIBRE DIRECTIONS...
----> Creating MatAxis entries
Done
SETTING FIBRE DIRECTIONS...
----> Creating MatAxis entries
Done
ans =
1.1952 1.1952 0.7000
1.1317 1.2621 0.7000
testGibbon -> Test file:34 of 59 DEMO_FEBio_iFEA_uniaxial_transiso_03.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:03:56
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:03:56
SETTING MATERIAL PARAMETERS...
Proposed (norm.): 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00 1.0000000000000000e+00
Proposed : 3.0574504020000002e-04 2.0065098364181999e+00 9.0589636800000002e-05 2.3509200705586269e+02 3.2942189118587999e+00
Set (constr.) : 3.0574504020000002e-04 2.0065098364181999e+00 9.0589636800000002e-05 2.3509200705586269e+02 3.2942189118587999e+00
Done
SETTING FIBRE DIRECTIONS...
----> Creating MatAxis entries
Done
SETTING FIBRE DIRECTIONS...
----> Creating MatAxis entries
Done
ans =
1.1952 1.1952 0.7000
1.2630 1.1309 0.7000
testGibbon -> Test file:35 of 59 DEMO_FEBio_layered_spatvar.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:04:02
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_layered_spatvar (line 225)
In run (line 91)
In testGibbon (line 72)]
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_layered_spatvar (line 225)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:04:09
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:04:09
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:04:10
------- converged at time : 0.1
------- converged at time : 0.19273
------- converged at time : 0.27873
------- converged at time : 0.358499
------- converged at time : 0.432499
------- converged at time : 0.501158
------- converged at time : 0.569817
------- converged at time : 0.638476
------- converged at time : 0.702191
------- converged at time : 0.765905
------- converged at time : 0.825041
------- converged at time : 0.884178
------- converged at time : 0.943314
------- converged at time : 1
--- Done --- 19-Dec-2017 16:04:41
testGibbon -> Test file:36 of 59 DEMO_FEBio_multi_scale_analysis.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:04:56
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:04:56
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:04:56
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:04:56
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
--- Done --- 19-Dec-2017 16:04:56
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:05:02
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:05:11
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:05:11
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:05:12
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
--- Done --- 19-Dec-2017 16:10:29
MException with properties:
identifier: 'MATLAB:UndefinedFunction'
message: 'Undefined function or variable 'fdsafas'.'
cause: {}
stack: [3×1 struct]
testGibbon -> Test file:37 of 59 DEMO_FEBio_multigen_interface_active.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:10:31
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:10:31
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:10:32
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:10:32
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
Delaunizing vertices...
Delaunay seconds: 0.013
Creating surface mesh ...
Surface mesh seconds: 0.004
Recovering boundaries...
Boundary recovery seconds: 0.004
Removing exterior tetrahedra ...
Spreading region attributes.
Exterior tets removal seconds: 0.003
Recovering Delaunayness...
Delaunay recovery seconds: 0.003
Refining mesh...
Refinement seconds: 0.107
Optimizing mesh...
Optimization seconds: 0.016
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.node.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.ele.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.face.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.1.edge.
Output seconds: 0.116
Total running seconds: 0.266
Statistics:
Input points: 2189
Input facets: 4466
Input segments: 6655
Input holes: 0
Input regions: 2
Mesh points: 7507
Mesh tetrahedra: 41333
Mesh faces: 84723
Mesh faces on exterior boundary: 4114
Mesh faces on input facets: 4466
Mesh edges on input segments: 6655
Steiner points inside domain: 5318
--- Done --- 19-Dec-2017 16:10:32
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:10:32
--- Done --- 19-Dec-2017 16:10:32
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:10:34
Adding Module level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding tet4 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining surface loads
Adding LoadData level
----> Defining load curves
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Control field
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_multigen_interface_active (line 542)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:11:01
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:11:01
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:11:03
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
------- converged at time : 1.05
------- converged at time : 1.1
------- converged at time : 1.15
------- converged at time : 1.2
------- converged at time : 1.25
------- converged at time : 1.3
------- converged at time : 1.35
------- converged at time : 1.4
------- converged at time : 1.45
------- converged at time : 1.5
------- converged at time : 1.55
------- converged at time : 1.6
------- converged at time : 1.65
------- converged at time : 1.7
------- converged at time : 1.75
------- converged at time : 1.8
------- converged at time : 1.85
------- converged at time : 1.9
------- converged at time : 1.95
------- converged at time : 2
------- converged at time : 2.05
------- converged at time : 2.1
------- converged at time : 2.15
------- converged at time : 2.2
------- converged at time : 2.25
------- converged at time : 2.3
------- converged at time : 2.35
------- converged at time : 2.4
------- converged at time : 2.45
------- converged at time : 2.5
------- converged at time : 2.55
------- converged at time : 2.6
------- converged at time : 2.65
------- converged at time : 2.7
------- converged at time : 2.75
------- converged at time : 2.8
------- converged at time : 2.85
------- converged at time : 2.9
------- converged at time : 2.95
------- converged at time : 3
--- Done --- 19-Dec-2017 16:11:57
testGibbon -> Test file:38 of 59 DEMO_FEBio_skin_sphere_indentation.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:12:12
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding tri3 element entries....
----> Adding quad4 element entries....
----> Adding element data field
----> Thickness data entries found
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Contact field
----> Defining contact
----> Setting contact parameters
----> Defining contact surface pair
Adding Constraints level
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_skin_sphere_indentation (line 282)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:12:13
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:12:13
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:12:13
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.125
------- converged at time : 0.155
------- converged at time : 0.189
------- converged at time : 0.2262
------- converged at time : 0.26596
------- converged at time : 0.286117
------- converged at time : 0.312243
------- converged at time : 0.343143
------- converged at time : 0.377863
------- converged at time : 0.415567
------- converged at time : 0.455729
------- converged at time : 0.476795
------- converged at time : 0.503647
------- converged at time : 0.535128
------- converged at time : 0.567612
------- converged at time : 0.603598
------- converged at time : 0.642388
------- converged at time : 0.683419
------- converged at time : 0.726244
------- converged at time : 0.748357
------- converged at time : 0.776048
------- converged at time : 0.8082
------- converged at time : 0.843922
------- converged at time : 0.882499
------- converged at time : 0.923361
------- converged at time : 0.966051
------- converged at time : 1
--- Done --- 19-Dec-2017 16:12:39
testGibbon -> Test file:39 of 59 DEMO_FEBio_skin_sphere_indentation_tet4_vs_tet10.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:12:42
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:12:42
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:12:42
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:12:42
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:12:43
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:12:43
--- Done --- 19-Dec-2017 16:12:43
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:12:44
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet10 element entries....
----> Adding tri3 element entries....
----> Adding tri3 element entries....
----> Adding element data field
----> Thickness data entries found
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Contact field
----> Defining contact
----> Setting contact parameters
----> Defining contact surface pair
Adding Constraints level
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_skin_sphere_indentation_tet4_vs_tet10 (line 363)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:12:46
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:12:46
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:12:46
------- converged at time : 0.0333335
------- converged at time : 0.0733337
------- converged at time : 0.0960005
------- converged at time : 0.120212
E R R O R T E R M I N A T I O N
--- FAILED: FEBio error! Check log-file --- 19-Dec-2017 16:12:57
--- Failed or ended! --- 19-Dec-2017 16:12:57
testGibbon -> Test file:40 of 59 DEMO_FEBio_slab_displacement_loading_01.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:12:58
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:12:58
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:12:58
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:12:58
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:12:58
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:12:58
--- Done --- 19-Dec-2017 16:12:58
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:12:59
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_slab_displacement_loading_01 (line 291)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:13:01
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:13:01
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:13:01
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:13:04
testGibbon -> Test file:41 of 59 DEMO_FEBio_slab_pressure_loading_01.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:13:06
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:13:06
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:13:06
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:13:06
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:13:06
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:13:06
--- Done --- 19-Dec-2017 16:13:06
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:13:07
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining surface loads
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_slab_pressure_loading_01 (line 301)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:13:09
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:13:09
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:13:09
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:13:14
testGibbon -> Test file:42 of 59 DEMO_FEBio_slab_pressure_loading_02.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:13:15
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:13:15
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:13:15
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:13:15
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:13:16
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:13:16
--- Done --- 19-Dec-2017 16:13:16
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:13:17
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining surface loads
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_slab_pressure_loading_02 (line 266)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:13:20
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:13:20
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:13:21
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:13:31
testGibbon -> Test file:43 of 59 DEMO_FEBio_slab_pressure_loading_03.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:13:33
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:13:33
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:13:33
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:13:33
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:13:33
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:13:33
--- Done --- 19-Dec-2017 16:13:34
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:13:35
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining surface loads
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_slab_pressure_loading_03 (line 290)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:13:36
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:13:36
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:13:37
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:13:42
testGibbon -> Test file:44 of 59 DEMO_FEBio_spatially_varying_material_parameters.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:13:44
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_spatially_varying_material_parameters (line 204)
In run (line 91)
In testGibbon (line 72)]
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_FEBio_spatially_varying_material_parameters (line 204)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:13:47
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:13:47
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:13:47
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:14:14
98 end
q_test
q_test =
44
if system_dependent('IsDebugMode')==1, dbcont; end
testGibbon -> Test file:45 of 59 DEMO_FEBio_strip_multi_step_clamp.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:14:34
Adding Module level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding LoadData level
----> Defining load curves
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Step level
----> Adding Module field
----> Adding Boundary field
----> Defining prescribe type boundary conditions
----> Adding Control field
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:14:38
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:14:38
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:14:38
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
------- converged at time : 1.05
------- converged at time : 1.1
------- converged at time : 1.15
------- converged at time : 1.2
------- converged at time : 1.25
------- converged at time : 1.3
------- converged at time : 1.35
------- converged at time : 1.4
------- converged at time : 1.45
------- converged at time : 1.5
------- converged at time : 1.55
------- converged at time : 1.6
------- converged at time : 1.65
------- converged at time : 1.7
------- converged at time : 1.75
------- converged at time : 1.8
------- converged at time : 1.85
------- converged at time : 1.9
------- converged at time : 1.95
------- converged at time : 2
--- Done --- 19-Dec-2017 16:15:01
testGibbon -> Test file:46 of 59 DEMO_FEBio_tongue.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:15:07
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding hex8 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:15:08
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:15:08
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:15:08
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.41
------- converged at time : 0.478
------- converged at time : 0.549777
------- converged at time : 0.627064
------- converged at time : 0.708894
------- converged at time : 0.794357
------- converged at time : 0.882728
------- converged at time : 0.971728
------- converged at time : 1
--- Done --- 19-Dec-2017 16:15:09
testGibbon -> Test file:47 of 59 DEMO_FEBio_trabeculae_compression.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:15:13
[Warning: smeshStruct.smeshName input will be replaced by
smeshStruct.modelName in future releases!]
[> In runTetGen (line 173)
In DEMO_FEBio_trabeculae_compression (line 200)
In run (line 91)
In testGibbon (line 72)]
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:15:13
[Warning: smeshStruct.smeshName input will be replaced by
smeshStruct.modelName in future releases!]
[> In writeBasicSmesh (line 19)
In runTetGen (line 253)
In DEMO_FEBio_trabeculae_compression (line 200)
In run (line 91)
In testGibbon (line 72)]
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:15:13
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:15:13
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:15:14
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:15:14
--- Done --- 19-Dec-2017 16:15:14
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:15:16
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:15:22
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:15:22
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:15:23
------- converged at time : 0.05
------- converged at time : 0.1
------- converged at time : 0.15
------- converged at time : 0.2
------- converged at time : 0.25
------- converged at time : 0.3
------- converged at time : 0.35
------- converged at time : 0.4
------- converged at time : 0.45
------- converged at time : 0.5
------- converged at time : 0.55
------- converged at time : 0.6
------- converged at time : 0.65
------- converged at time : 0.7
------- converged at time : 0.75
------- converged at time : 0.8
------- converged at time : 0.85
------- converged at time : 0.9
------- converged at time : 0.95
------- converged at time : 1
--- Done --- 19-Dec-2017 16:15:49
98 end
q_test
q_test =
47
dbcont
testGibbon -> Test file:48 of 59 DEMO_MixedTetHexMeshing.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:05
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:16:05
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:16:05
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:05
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.smesh.
Delaunizing vertices...
Delaunay seconds: 0.024
Creating surface mesh ...
Surface mesh seconds: 0.004
Recovering boundaries...
Boundary recovery seconds: 0.016
Removing exterior tetrahedra ...
Spreading region attributes.
Exterior tets removal seconds: 0.004
Suppressing Steiner points ...
Steiner suppression seconds: 0
Recovering Delaunayness...
Delaunay recovery seconds: 0.006
Refining mesh...
Refinement seconds: 0.036
Optimizing mesh...
Optimization seconds: 0.007
Jettisoning redundant points.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.1.node.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.1.ele.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.1.face.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.1.edge.
Output seconds: 0.064
Total running seconds: 0.161
Statistics:
Input points: 2729
Input facets: 5460
Input segments: 8185
Input holes: 1
Input regions: 1
Mesh points: 3528
Mesh tetrahedra: 13980
Mesh faces: 30690
Mesh faces on exterior boundary: 5460
Mesh faces on input facets: 5460
Mesh edges on input segments: 8185
Steiner points inside domain: 799
--- Done --- 19-Dec-2017 16:16:05
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:16:05
--- Done --- 19-Dec-2017 16:16:05
98 end
if system_dependent('IsDebugMode')==1, dbcont; end
testGibbon -> Test file:49 of 59 DEMO_MixedTetHexMeshing_torus.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:27
[Warning: smeshStruct.smeshName input will be replaced by
smeshStruct.modelName in future releases!]
[> In runTetGen (line 173)
In DEMO_MixedTetHexMeshing_torus (line 214)
In run (line 91)
In testGibbon (line 72)]
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:16:27
[Warning: smeshStruct.smeshName input will be replaced by
smeshStruct.modelName in future releases!]
[> In writeBasicSmesh (line 19)
In runTetGen (line 253)
In DEMO_MixedTetHexMeshing_torus (line 214)
In run (line 91)
In testGibbon (line 72)]
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:16:27
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:27
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tetGenModel.smesh.
Initializing memorypools.
tetrahedron per block: 8188.
Size of a point: 128 bytes.
Size of a tetrahedron: 112 (112) bytes.
Size of a shellface: 192 (192) bytes.
Initializing robust predicates.
sizeof(double) = 8
machine epsilon = 2.22045e-016 [IEEE 754 64-bit macheps]
Permuting vertices.
Sorting vertices.
Incrementally inserting vertices.
7188 (10775) subfaces (segments).
Recovering segments.
10769 (6) segments are recovered (missing).
10773 (2) segments are recovered (missing).
Added 2 Steiner points in volume.
Recovering facets.
7188 (0) subfaces are recovered (missing).
Removed 2 exterior Steiner vertices.
Found 1 domain.
Initial obj = 3287.0308670114277
Final obj = 3286.9902285162125
Min radiu-edge ratio = 1.2.
Min dihedral angle = 0.
Splitting bad quality tets.
Added 316 (0,0,316) Steiner points.
Performed 1 flips.
Optimization level = 2.
Optimization scheme = 7.
Number of iteration = 3.
Min_Max dihed angle = 165.
Removed 353 edges.
0 duplicated vertices are removed.
2 unused vertices are removed.
--- Done --- 19-Dec-2017 16:16:28
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:16:28
--- Done --- 19-Dec-2017 16:16:28
testGibbon -> Test file:50 of 59 DEMO_additional_colormaps.m
testGibbon -> Test file:51 of 59 DEMO_create_run_import_FEBIO_spheres.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:35
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:16:35
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:16:35
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:35
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:16:36
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:16:36
--- Done --- 19-Dec-2017 16:16:36
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:16:37
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding NodeSet field
Adding Boundary level
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:16:39
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:16:39
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:16:39
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:16:44
testGibbon -> Test file:52 of 59 DEMO_create_run_import_FEBIO_spheres_pressure.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:46
[Warning: smeshStruct.smeshName input will be replaced by
smeshStruct.modelName in future releases!]
[> In runTetGen (line 173)
In DEMO_create_run_import_FEBIO_spheres_pressure (line 126)
In run (line 91)
In testGibbon (line 72)]
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:16:46
[Warning: smeshStruct.smeshName input will be replaced by
smeshStruct.modelName in future releases!]
[> In writeBasicSmesh (line 19)
In runTetGen (line 253)
In DEMO_create_run_import_FEBIO_spheres_pressure (line 126)
In run (line 91)
In testGibbon (line 72)]
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:16:46
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:46
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:16:46
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:16:46
--- Done --- 19-Dec-2017 16:16:46
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:16:47
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining surface loads
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
[Warning: Provided path of logfile is replaced by .feb
file path. Only provide filename to avoid this warning]
[> In addOutputLevel_FEB (line 70)
In febStruct2febFile (line 109)
In DEMO_create_run_import_FEBIO_spheres_pressure (line 300)
In run (line 91)
In testGibbon (line 72)]
Writing .feb file
--- Done --- 19-Dec-2017 16:16:48
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:16:48
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:16:48
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:16:51
testGibbon -> Test file:53 of 59 DEMO_create_run_import_FEBIO_spheres_traction.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:16:53
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:16:53
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:16:53
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:16:53
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:16:53
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:16:53
--- Done --- 19-Dec-2017 16:16:53
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing FEBio XML object --- 19-Dec-2017 16:16:54
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding surface field
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
Adding Loads level
----> Defining surface loads
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:17:00
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- STARTING FEBIO JOB --- 19-Dec-2017 16:17:00
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:17:00
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:17:07
98 end
q_test
q_test =
53
if system_dependent('IsDebugMode')==1, dbcont; end
testGibbon -> Test file:54 of 59 DEMO_femur_STL_surface_improvement.m
testGibbon -> Test file:55 of 59 DEMO_geodesic_remeshing.m
testGibbon -> Test file:56 of 59 DEMO_import_FEB_export_INP.m
--- import_FEB ---
IMPORTING .FEB XML
---> Getting nodes
---> Imported 25328 nodes
---> Getting elements
---> Imported 4536 quad4 elements
---> Imported 21252 hex8 elements
DONE!
--- export_INP ---
CREATING NODE AND ELEMENT TEXT FIELDS
---> Creating node text field
---> Creating element text field
EXPORTING TO INP FILE...
DONE!
--- export_INP ---
CREATING NODE AND ELEMENT TEXT FIELDS
---> Creating node text field
---> Creating element text field
EXPORTING TO INP FILE...
DONE!
testGibbon -> Test file:57 of 59 DEMO_surface_smooth_methods.m
testGibbon -> Test file:58 of 59 DEMO_tetGen_mesh_sizing_function_1.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:18:18
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Writing SMESH file --- 19-Dec-2017 16:18:18
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:18:19
--- Writing MTR file --- 19-Dec-2017 16:18:19
--- Running TetGen to mesh initial Delaunay tesselation using sizing function--- 19-Dec-2017 16:18:19
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.smesh.
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.mtr.
Cannot access file E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.b.node.
Delaunizing vertices...
Delaunay seconds: 0.002
Creating surface mesh ...
Surface mesh seconds: 0.001
Constrained Delaunay...
Constrained Delaunay seconds: 0.001
Removing exterior tetrahedra ...
Spreading region attributes.
Exterior tets removal seconds: 0
Refining mesh...
Refinement seconds: 0.027
Optimizing mesh...
Optimization seconds: 0.002
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.node.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.ele.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.face.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.edge.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.mtr.
Writing E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\temp.1.p2t.
Output seconds: 0.068
Total running seconds: 0.101
Statistics:
Input points: 210
Input facets: 416
Input segments: 88
Input holes: 0
Input regions: 1
Mesh points: 1641
Mesh tetrahedra: 7393
Mesh faces: 15644
Mesh faces on exterior boundary: 1716
Mesh faces on input facets: 1716
Mesh edges on input segments: 165
Steiner points on input facets: 573
Steiner points on input segments: 77
Steiner points inside domain: 781
--- Done --- 19-Dec-2017 16:18:19
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- Importing TetGen files --- 19-Dec-2017 16:18:19
--- Done --- 19-Dec-2017 16:18:19
testGibbon -> Test file:59 of 59 DEMO_vessel_FEBIO_fibre_mapping.m
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
--- TETGEN Tetrahedral meshing --- 19-Dec-2017 16:18:22
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--- Writing SMESH file --- 19-Dec-2017 16:18:22
----> Adding node field
----> Adding facet field
----> Adding holes specification
----> Adding region specification
--- Done --- 19-Dec-2017 16:18:22
--- Running TetGen to mesh input boundary--- 19-Dec-2017 16:18:22
Opening E:\MainWork\WIP\GIBBON\lib_ext\tetGen\tempFiles\tempModel.smesh.
--- Done --- 19-Dec-2017 16:18:22
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--- Importing TetGen files --- 19-Dec-2017 16:18:22
--- Done --- 19-Dec-2017 16:18:22
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--- Writing FEBio XML object --- 19-Dec-2017 16:18:26
Adding Module level
Adding Control level
Adding Globals level
Adding Material level
Adding Geometry level
----> Adding node field
----> Adding element field
----> Adding tet4 element entries....
----> Adding element data field
----> MatAxis data entries found
----> Adding NodeSet field
Adding Boundary level
----> Defining fix type boundary conditions
----> Defining prescribe type boundary conditions
Adding LoadData level
----> Defining load curves
Adding Output level
----> Adding plotfile field
----> Adding logfile field
Writing .feb file
--- Done --- 19-Dec-2017 16:18:29
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--- STARTING FEBIO JOB --- 19-Dec-2017 16:18:29
Waiting for log file...
Proceeding to check log file...19-Dec-2017 16:18:29
------- converged at time : 0.1
------- converged at time : 0.2
------- converged at time : 0.3
------- converged at time : 0.4
------- converged at time : 0.5
------- converged at time : 0.6
------- converged at time : 0.7
------- converged at time : 0.8
------- converged at time : 0.9
------- converged at time : 1
--- Done --- 19-Dec-2017 16:18:31