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#model_parentdir /cluster/zeng/research/kmer/s3/tf-chipseq/
#expt_name Mayers_UGF1_HepG2_win50.ccm
#maxchr 22
#genomefile /cluster/projects/wordfinder/data/genome/hg19.in
#snp_dir /cluster/zeng/research/kmer/hg19/FINAL.ver140827/SNP_data/USF1/BCRANK_AF001_1KG_1000flank_AF001_1KG/
#snp_name BCRANK_1000flank_AF001_1KG
#VT 1
#VT_prefix VT=
#VT_suffix SNP
#outputdir /cluster/zeng/code/research/test/