Source code for running the WordPress GigaBlog website
Source code for running GigaDB
Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Painting assay.
Source code from Jarvis et al., (2015) Phylogenomic analyses data of the avian phylogenomics project. GigaScience 4:4.
A GA4GH Draft Beacon implementation
Galaxy wrappers for the SmileFinder set of tools.
Galaxy wrappers for BGI's SOAP tools including SOAPdenovo2.
Data intensive biology for everyone.
Web application for displaying Galaxy workflows using cytoscape.js
Demo application for AWS project
Docker image and Galaxy tools from Aranguren and Wilkinson (2015) Enhanced reproducibility of SADI web service workflows with Galaxy and Docker.
Source code from Chiu and Hsu, (2015) Determination of Nonlinear Genetic Architecture using Compressed Sensing.
Galaxy wrappers for the Genome Diversity set of tools from Bedoya-Reina et al., (2013) Galaxy tools to study genome diversity. GigaScience 2:17
Galaxy wrapping of the analysis developed by Genome Assembly Gold-Standard Evaluations (GAGE).
A Galaxy wrapper to return bacterial genome assemblies made by ALL-PATHS presented in Luo et al., (2012) SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaScience 2012, 1:18
Genome assembly pipelines from Luo et al., (2012) SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaScience 1:18
Source code from Sonnenschein et al., (2015) An image database of Drosophila melanogaster wings for phenomic and biometric analysis. GigaScience 4:25
Source code for SOAPdenovo2 from Luo et al., (2012) SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. GigaScience 1:18
Source code from Guiblet et al., (2014) SmileFinder: a resampling-based approach to evaluate signatures of selection from genome-wide sets of matching allele frequency data in two or more diploid populations. GigaScience 2015, 4:1
Source code from Al-Nasir and Shanahan, (2015) Investigation into the annotation of protocol sequencing steps in the Sequence Read Archive. GigaScience 4:23
An archive of the code used for evaluating assemblies from GAGE.
Source code and binaries for the SOAP2 alignment tool developed by BGI.
Source code and binaries for the SOAP1 alignment tool developed by BGI.
Source code for Kilianski et al., (2015) Bacterial and viral identification and differentiation by amplicon sequencing on the MinION nanopore sequencer. GigaScience 4:12
Source code from Zaritsky et al., (2015) Live time-lapse dataset of in vitro wound healing experiments. GigaScience 4:8