Powerful phylogenetic tree and alignment plots with ggphylo
ggphylo provides convenient functions and tools for visualizing
phylogenetic data in R. A variety of methods are provided to simplify
the process of working with
phylo objects (e.g., phylogenies
derived from the ape package), and the
ggphylo function allows one
to easily visualize data along phylogenetic trees.
See the vignette for examples of the package's main functionality.