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OMERO image region Vert.x asynchronous microservice server
OMERO thumbnail Vert.x asynchronous microservice server
OMERO pixel buffer Vert.x asynchronous microservice server
OMERO Vert.x microservice core
Plugins for OMERO
OMERO client object experiment
Cool Organisation Redmine GitHub Integration
Renames exported supplementary material assets based on Cadmus XML metadata
OME Project User Guides
OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded …
Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar
Python library and shell utilities to monitor filesystem events.
Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment (particularly UW-Madison LOCI and Glencoe Software). Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.
A general illumination correction method for optical microscopy.
Pure Python implementation of python-bioformats reader API using OMERO
OMERO Elasticsearch utilities
Video.js - open source HTML5 & Flash video player
All Ice source code starting with 1.0.0. Each tarball (Ice-x.y.z.tar.gz) imported into git. See http://zeroc.com/download.html for the originals. The OME team maintains this repository, not as a replacement for the official ZeroC tarballs, but to facilitate custom builds on platforms for our users. Contact us for more information.
superproject for puppet configurations
Root homedir configs and assorted files
self-contained omero configuration for puppet
database configurations puppet module