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maps identifiers and names to taxonomic names and ontological terms
source files for GloBI website
Checks whether datasets are ready for GloBI ingestion
Archives of PHI-base data releases, and other data.
list of manual taxonomic name mappings and taxonomic stop words
Dataset dynamically extracted from iNaturalist
Builder for Global Biotic Interactions Taxon Graph
commandline tool to access existing species interaction datasets
(experimental) lists of suspicious names and correction suggestions
A java library to parse and present Digital Object Identifiers (DOIs)
links to C. Anela Choy, Steven H. D. Haddock, Bruce H. Robison. 2017. Deep pelagic food web structure as revealed by in situ feeding observations. Proc. R. Soc. B 2017 284 20172116; DOI:10.1098/rspb.2017.2116.
Common Names of Plant Diseases by the American Phytopathological Society www.apsnet.org/publications/commonnames
Gray C, Ma A, Perkins D, Hudson L, Figueroa D, Woodward G (2015). Database of trophic interactions. Zenodo. http://dx.doi.org/10.5281/zenodo.13751
Discover interaction data in C. Dieter Zander, Neri Josten, Kim C. Detloff, Robert Poulin, John P. McLaughlin, and David W. Thieltges. 2011. Food web including metazoan parasites for a brackish shallow water ecosystem in Germany and Denmark. Ecology 92:2007.
Discover interaction data in David W. Thieltges, Karsten Reise, Kim N. Mouritsen, John P. McLaughlin, and Robert Poulin. 2011. Food web including metazoan parasites for a tidal basin in Germany and Denmark. Ecology 92:2005.
Discover interaction data in Kim N. Mouritsen, Robert Poulin, John P. McLaughlin and David W. Thieltges. 2011. Food web including metazoan parasites for an intertidal ecosystem in New Zealand. Ecology 92:2006.
Discover interaction data in Daniel L. Preston, Sarah A. Orlofske, John P. McLaughlin, and Pieter T. J. Johnson. 2012. Food web including infectious agents for a California freshwater pond. Ecology 93:1760
Discover data in Benjamin Planque, Raul Primicerio, Kathrine Michalsen, Michaela Aschan, Grégoire Certain, Padmini Dalpadado, Harald Gjøsæater, Cecilie Hansen, Edda Johannesen, Lis Lindal Jørgensen, Ina Kolsum, Susanne Kortsch, Lise-Marie Leclerc, Lena Omli, Mette Skern-Mauritzen, and Magnus Wiedmann 2014. Who eats whom in the Barents Sea: a foo…
Discover data in Ryan F. Hechinger, Kevin D. Lafferty, John P. McLaughlin, Brian L. Fredensborg, Todd C. Huspeni, Julio Lorda, Parwant K. Sandhu, Jenny C. Shaw, Mark E. Torchin, Kathleen L. Whitney, and Armand M. Kuris 2011. Food webs including parasites, biomass, body sizes, and life stages for three California/Baja California estuaries. Ecolog…
Dataset extracted from Barnes 2008
This project provides a list of known projects and studies that contain interaction data, that may or may not have been made available.
Dockerfile for Apache Kafka
Saito MU, Jinbo U, Yago M, Kurashima O, Ito M (2016) Larval host records of butterflies in Japan. Ecological Research 31: 491. DOI:10.1007/s11284-016-1365-8
Bello, C., Galetti, M., Montan, D., Pizo, M. A., Mariguela, T. C., Culot, L., Bufalo, F., Labecca, F., Pedrosa, F., Constantini, R., Emer, C., Silva, W. R., da Silva, F. R., Ovaskainen, O. and Jordano, P. (2017), Atlantic frugivory: a plant–frugivore interaction data set for the Atlantic Forest. Ecology, 98: 1729. doi:10.1002/ecy.1818
an archive for GloBI source datasets
Template species interaction data repository compatible with globalbioticinteractions.org
Food Webs and Species Interactions in the Biodiversity of UK and Ireland
Pest Lists of US National Cooperative Argicultural Pest Survey
Lupinus nipomensis species interaction data repository compatible with globalbioticinteractions.org from a study completed in spring 2017 in coastal california
GlobalWeb (https://globalwebdb.com): An online collection of food webs. 2012. University of Canberra, Australia.