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José Augusto Salim edited this page Jan 4, 2023
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7 revisions
| Property | Value |
|---|---|
| #CPU's | 80 |
| RAM | 1T |
| OS | Ubuntu 20.04.05 LTS (focal) |
| STORAGE |
500G(SSD) |
| Java (jre) | openjdk 1.8.0_342 |
| Elton version | 0.12.4 |
| Preston version | 0.4.5 |
| Nomer version | 0.4.0 |
-
Install Java JRE:
sudo apt install openjdk-8-jre -
Clone the repository https://github.com/zedomel/globi-dwca-index which contains the main script:
git clone https://github.com/zedomel/globi-dwca-index -
Download and install
preston:
sudo sh -c '(curl -L https://github.com/bio-guoda/preston/releases/download/0.4.5/preston.jar) > /usr/local/bin/preston && chmod +x /usr/local/bin/preston && preston config-manpage' && preston version- Download and install
elton:
sudo sh -c '(echo "#!/usr/bin/env sh" && curl -L https://github.com/globalbioticinteractions/elton/releases/download/0.12.4/elton.jar) > /usr/local/bin/elton && chmod +x /usr/local/bin/elton' && elton version- Download and install
nomer:
sudo sh -c '(curl -L https://github.com/globalbioticinteractions/nomer/releases/download/0.4.0/nomer.jar) > /usr/local/bin/nomer && chmod +x /usr/local/bin/nomer && nomer install-manpage && nomer clean && nomer version'