This repository contains PyIOmica, a Python package that provides bioinformatics utilities for analyzing (dynamic) omics datasets. PyIOmica extends MathIOmica usage to Python and implements new visualizations and computational tools for graph analyses.
- 1.0.2 : Setup updates
- 1.0.1 : Setup updates
- 1.0.0 : Initial Release
PyIOmica Installation Instructions
To install PyIOmica on any platform you need: 1. Python version 3.7 or higher 2. Recommended: 16GB of RAM or higher
- To install the current release from PyPI (Python Package Index) use pip:
pip install pyiomica
Alternatively, you can install directly from github using:
pip install git+https://github.com/gmiaslab/pyiomica/
B. RUNNING PyIOmica
After installation you can run:
>>> from pyiomica import pyiomica
Documentation for PyIOmica is built-in and is available through the help() functionality in Python.
D. ADDITIONAL INFORMATION
- PyIOmica is a multi-omics analysis framework distributed as a Python package that aims to assist in bioinformatics.
- The most current version of the package is maintained at https://github.com/gmiaslab/pyiomica
- News are distributed via twitter (@mathiomica)
PyIOmica is released under an MIT License. Please also consult the folder LICENSES distributed with PyIOmica regarding Licensing information for use of external associated content.