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"start" attribute in last column of GFF3 file results in bad coordinates for the feature in GFF3Tabix mode #1364
We have such a GFF3 file:
I guess, in case 1, the "start" attribute in last column of the GFF3 is used as the start coordinate for the feature sequence whereas it should not.
technically this is due to the jbrowse feature model. JBrowse has the "SimpleFeature" type that just does
feature.get('start') to refer to the column 3, and then it ends up overwriting that with the attribute named start
We would have to emulate the behavior of NCLIst e.g. renaming it 'start2' to make it work