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Enable generate-names.pl indexed fasta refseqs in minimal config #1282

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merged 2 commits into from Dec 12, 2018

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cmdcolin commented Dec 11, 2018

This enables generate-names.pl to work when the "refSeqs" config is manually pointing to an FAI file

Xref #1281

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cmdcolin commented Dec 12, 2018

Now this has a --bgzip_fasta option for prepare-refseqs.pl

@cmdcolin cmdcolin force-pushed the add_fai_refseqs branch from c319547 to 3a5c469 Dec 12, 2018

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cmdcolin commented Dec 12, 2018

I'll go ahead and merge this, if there is any concern let me know!

@cmdcolin cmdcolin merged commit b66854c into dev Dec 12, 2018

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@cmdcolin cmdcolin deleted the add_fai_refseqs branch Dec 12, 2018

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