MotionMapper

Sample implementation of the MotionMapper behavioral analysis methods initially described in the paper “Mapping the stereotyped behaviour of freely-moving fruit flies” by Berman, GJ, Choi, DM, Bialek, W, and Shaevitz, JW, J. Royal Society Interface, 99, 20140672 (2014).

Name		Name	Last commit message	Last commit date
Latest commit History 54 Commits
PCA		PCA
segmentation_alignment		segmentation_alignment
t_sne		t_sne
utilities		utilities
wavelet		wavelet
.DS_Store		.DS_Store
.gitignore		.gitignore
README.md		README.md
README.txt		README.txt
findEmbeddings.m		findEmbeddings.m
findPosturalEigenmodes.m		findPosturalEigenmodes.m
findProjections.m		findProjections.m
findRadonPixels.m		findRadonPixels.m
findWavelets.m		findWavelets.m
parameters.txt		parameters.txt
runAlignment.m		runAlignment.m
runEmbeddingSubSampling.m		runEmbeddingSubSampling.m
runExample.m		runExample.m
runExample_noSubsampling.m		runExample_noSubsampling.m
run_tSne.m		run_tSne.m
setRunParameters.m		setRunParameters.m

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MotionMapper

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