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Viral dynamics of acute SARS-CoV-2 infection and applications to diagnostic and public health strategies

Stephen M. Kissler, Joseph R. Fauver, Christina Mack, Caroline Tai, Kristin Y. Shiue, Chaney C. Kalinich, Sarah Jednak, Isabel M. Ott, Chantal B.F. Vogels, Jay Wohlgemuth, James Weisberger, John DiFiori, Deverick J. Anderson, Jimmie Mancell, David D. Ho, Nathan D. Grubaugh, Yonatan H. Grad

These files provide the data and code needed to reproduce the figures and key findings from this manuscript. The central file is code/analysis/run_analysis.R, which calls all other necessary files and generates figures.

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