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MergeJavaResources fix introduces artificial skipWhenEmpty #78

@ghale

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@ghale

The MergeJavaResources fix creates a new input that is marked with skipWhenEmpty(true). This is normally not a problem, but in situations where the inputs are empty, this will cause the task to be skipped with a NO-SOURCE outcome rather than creating an empty jar. This causes problems for downstream tasks that expect the jar to exist, even if it is empty.

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