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| # Generated by roxygen2: do not edit by hand | |
| export(AncStateEstMatrix) | |
| export(ChangesInBins) | |
| export(ChronoPhyloMorphospacePlot) | |
| export(CompactifyMatrix) | |
| export(CorrectRootTime) | |
| export(DiscreteCharacterRate) | |
| export(DolloSCM) | |
| export(EdgeLengthsInBins) | |
| export(EdgeMatch) | |
| export(FindAncestor) | |
| export(FindLinkedEdges) | |
| export(GetAllStateChanges) | |
| export(GetDescendantEdges) | |
| export(GetNodeAges) | |
| export(MakeMorphMatrix) | |
| export(MatrixPruner) | |
| export(MinSpanTreeEdges) | |
| export(MorphDistMatrix) | |
| export(MorphDistMatrixFast) | |
| export(MorphMatrix2PCoA) | |
| export(MorphospacePlot) | |
| export(MultiMorphospacePlot) | |
| export(PhyloCharCompletenessInBins) | |
| export(PlotCharacterChanges) | |
| export(ReadMorphNexus) | |
| export(SafeTaxonomicReduction) | |
| export(SafeTaxonomicReinsertion) | |
| export(StackPlot) | |
| export(TrimMorphDistMatrix) | |
| export(WriteMorphNexus) | |
| export(WriteMorphTNT) | |
| exportPattern("^[[:alpha:]]+") | |
| import(ape) | |
| import(phytools) | |
| import(rgl) | |
| import(strap) | |
| importFrom(gdata,trim) | |
| importFrom(grDevices,adjustcolor) | |
| importFrom(grDevices,chull) | |
| importFrom(graphics,layout) | |
| importFrom(graphics,lines) | |
| importFrom(graphics,par) | |
| importFrom(graphics,plot) | |
| importFrom(graphics,points) | |
| importFrom(graphics,polygon) | |
| importFrom(graphics,text) | |
| importFrom(stats,as.dist) | |
| importFrom(stats,dist) | |
| importFrom(stats,dpois) | |
| importFrom(stats,pchisq) | |
| importFrom(stats,runif) | |
| importFrom(stats,var) | |
| importFrom(utils,combn) |