diff --git a/guide/tutorials/colbuilder.qmd b/guide/tutorials/colbuilder.qmd index eb7ef824..9451513e 100644 --- a/guide/tutorials/colbuilder.qmd +++ b/guide/tutorials/colbuilder.qmd @@ -146,7 +146,7 @@ By providing a gromacs index file with all backbone and crosslink atoms, the scr Such a index file can be generated with ```bash -echo 'backbone | r LY2 LY3_L4Y_L5Y_LYX' | gmx make_ndx -n index.ndx -o index.ndx +echo -ne "r ACE & a CH3\nr NME & a CH3\n\"Protein\"|\"Other\"\n\"Backbone\"| r LY2 LY3 L4Y L5Y LYX\nq\n"| gmx make_ndx -f npt.gro ``` Now let's look at the sequence.