hetmech: extracting mechanisms from hetnets
Hetmech aims to identify the relevant network connections between a set of query nodes. The method is designed to operate on hetnets (networks with multiple node or relationship types).
This project is still under development. Use with caution.
conda env create --file=environment.yml
conda activate hetmech and
conda deactivate to activate or deactivate the environment.
For local development, run the following with the hetmech environment activated:
pip install --editable .
This work is supported through a research collaboration with Pfizer Worldwide Research and Development. This work is funded in part by the Gordon and Betty Moore Foundation’s Data-Driven Discovery Initiative through Grants GBMF4552 to Casey Greene and GBMF4560 to Blair Sullivan.