Hetnet connectivity search prototyping and data repository
Hetmech is a project to extract mechanistic connections between nodes in hetnets. The project aims to identify the relevant network connections between a set of query nodes. The method is designed to operate on hetnets (networks with multiple node or relationship types).
hetmech python package has been renamed to
hetmatpy and relocated to
This repository is now used as a historical archive, as well as a dataset storage and method prototyping repository.
# install new hetmech environment conda env create --file=environment.yml # update existing hetmech environment conda env update --file=environment.yml
conda activate hetmech and
conda deactivate to activate or deactivate the environment.
This work was supported through a research collaboration with Pfizer Worldwide Research and Development. This work was funded in part by the Gordon and Betty Moore Foundation’s Data-Driven Discovery Initiative through Grants GBMF4552 to Casey Greene and GBMF4560 to Blair Sullivan.