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small windows format parse bug #10

wmnwmn opened this issue Aug 31, 2016 · 1 comment


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commented Aug 31, 2016

Query sequence headers of this form are not parsed right:
i.e., they have the windows-style newlines, and no other whitespace.

I will be submitting a fix on this issue.

groupschoof pushed a commit that referenced this issue Sep 2, 2016
Fixed issue #10
Proposed fix is not as flexible as the one implemented here.
Problem was caused by non *nix like line breaks like '\r'.
Now using regex (\r|\n)+ to split String into lines.

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commented Sep 2, 2016

Dear wmnwmn,

thank you very much for bringing this up and proposing a fix. Based on your suggestion I implemented a similar, slightly more flexible solution. It is now included in tag v3.3.2 (latest master).


@groupschoof groupschoof closed this Sep 2, 2016

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