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  1. Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

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  2. A primer for computational tools to analyze genetics of populations in R

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Repositories

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    Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

    R 119 25 134 0 Updated Dec 27, 2022
  • poppr Public

    🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction

    R 58 25 17 1 Updated Nov 5, 2022
  • metacoder_documentation Public

    Documentation for the metacoder R package

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    Repository to host tool-specific module files for the Nextflow DSL2 community!

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    Nextstrain analysis of Sugarcane yellow leaf virus

    Python 0 1 0 0 Updated Sep 14, 2022
  • OomyceteDB Public

    A new barcode for characterizing oomycete communities.

    HTML 1 1 14 0 Updated Jun 29, 2022
  • rps10_barcode Public

    Analysis code for "A new oomycete metabarcoding method using the rps10 gene"

    R 0 1 1 0 Updated Apr 5, 2022
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    Documentation for the nextstrain software installed on the oomy webserver

    Python 0 GPL-3.0 0 0 0 Updated Mar 4, 2022
  • oomycetedbtools Public

    An R package for some of the code used to keep oomycetedb.org up to date.

    R 0 0 0 0 Updated Feb 9, 2022
  • Pram_pacbio_EU1_NA1 Public

    Genome data associated with an MPMI Genome Announcement for Phytophthora ramorum EU1 and NA1 genomes

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