• Documentation for the metacoder R package

    HTML 1 Updated Aug 30, 2018
  • 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction

    R 29 12 Updated Aug 30, 2018
  • Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

    R 56 13 Updated Aug 29, 2018
  • Shell 1 Updated Aug 25, 2018
  • A primer for computational tools to analyze genetics of populations in R

    HTML 24 14 Updated Aug 9, 2018
  • This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://grunwaldlab.github.io/analysis_of_microbiome_community_data_in_r/

    HTML 7 3 Updated Aug 8, 2018
  • Documentation for vcfR

    HTML 4 Updated Jun 18, 2018
  • An R package to call oomycete effectors

    R 5 2 Updated Apr 20, 2018
  • vcfR

    Forked from knausb/vcfR

    Tools to work with variant call format files

    R 1 20 Updated Apr 17, 2018
  • My application for the 2017 rOpenSci fellowship

    TeX 2 Updated Jan 30, 2018
  • Genotyping by sequencing (GBS) analysis of P. rubi and P. fragaraie.

    Shell 1 Updated Oct 5, 2017
  • HTML Updated Aug 23, 2017
  • An R package for lab notebook upkeep

    R 1 1 Updated May 10, 2017
  • This site provides information on conducting reproducible science using the R language.

    HTML 8 3 Updated Nov 2, 2016
  • Examples for population genetics review manuscript

    HTML 1 Updated Oct 17, 2016
  • Our home webpage for GitHub projects

    HTML 1 Updated Oct 4, 2016
  • taxa

    Forked from ropensci/taxa
    R 6 Updated Sep 16, 2016
  • source data for the APS 2016 poster on Tools for analysis of clonal population genetic data in R

    HTML 1 Updated Jul 25, 2016
  • R package for making website representations of directories

    R 6 2 Updated Jul 19, 2016
  • An example analysis for calculating AUDPC using RMarkdown

    HTML 1 14 Updated Jul 14, 2016
  • Example data of P. infestans

    R 11 Updated Jul 12, 2016
  • Microbe-ID

    JavaScript 4 3 Updated Jun 21, 2016
  • Easy Interface to Effective Concentration Calculations

    R Updated Jun 12, 2016
  • A small package that allows import of GenAlEx data directly into poppr from excel

    R 1 Updated May 25, 2016
  • A collection of basic scripts used in bioinformatic analysis

    Updated Mar 24, 2016
  • Webpage of Phytophthora ID of the Grunwald lab.

    JavaScript 1 Updated Dec 16, 2015
  • HTML Updated Nov 19, 2015
  • Tools to explore sequencing coverage in high-throughput sequencing projects

    C++ 1 Updated Jul 8, 2015
  • Supplementary materials for Frontiers paper on novel R tools for population genomics

    HTML 1 1 GPL-3.0 Updated May 7, 2015
  • Scripts for RNAseq class

    HTML 6 Updated Mar 12, 2015