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  1. PoonLab/twt PoonLab/twt Public

    Generic framework for the coalescent simulation of pathogen trees within host trees in R

    R 3 2

  2. PoonLab/Kaphi PoonLab/Kaphi Public

    Kernel-embedded ABC-SMC for phylodynamic inference

    R 4 2

  3. PoonLab/sierra-local PoonLab/sierra-local Public

    Retrieve HIVdb algorithm as XML and apply locally to HIV sequences

    Python 6 3

  4. PoonLab/KaphiShiny PoonLab/KaphiShiny Public

    A Shiny web interface for running Kaphi

    R