diff --git a/.github/workflows/examples_check.yml b/.github/workflows/examples_check.yml new file mode 100644 index 0000000..b1e6246 --- /dev/null +++ b/.github/workflows/examples_check.yml @@ -0,0 +1,62 @@ +name: Notebook Execution and Error Check + +on: + push: + branches: + - main + pull_request: + branches: + - main + workflow_dispatch: # This enables manual triggering + +jobs: + execute_notebooks: + runs-on: LargeBois + strategy: + matrix: + transformers_version: ["transformers==4.48.0", "transformers==4.56.1", "--upgrade transformers"] + notebook: ["example.ipynb","Jsonformer_example.ipynb"] + env: + HUGGINGFACE_API_KEY: ${{ secrets.HUGGINGFACE_API_KEY }} + NLTK_DATA: /tmp/nltk_data + steps: + - name: Checkout repository + uses: actions/checkout@v4 + with: + ref: ${{ github.head_ref }} + fetch-depth: 0 + - name: Set up Python + uses: actions/setup-python@v5 + with: + python-version: 3.12.x + - name: Install dependencies + run: | + + # Setup Virtual Environment + python3 -m venv ./.venv + source .venv/bin/activate + + # Install the current branch + pip install ${{ matrix.transformers_version }} + pip install . + + # Install extra stuff for notebook runs + pip install "huggingface_hub[cli]" jupyter nbconvert ipykernel torch accelerate bitsandbytes + - name: Huggingface Hub Login + run: | + source .venv/bin/activate + huggingface-cli login --token $HUGGINGFACE_API_KEY + - name: Execute notebooks and check for errors + run: | + source .venv/bin/activate + echo "Processing ${{ matrix.notebook }}..." + # poetry run jupyter nbconvert --to notebook --execute "${{ matrix.notebook }}" + jupyter nbconvert --to notebook --execute "${{ matrix.notebook }}" + if [ $? -ne 0 ]; then + echo "Error found in ${{ matrix.notebook }}" + echo "Error in ${{ matrix.notebook }}. See logs for details." >> errors.txt + exit 1 + fi + + exit 0 + diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml new file mode 100644 index 0000000..f7e6c33 --- /dev/null +++ b/.github/workflows/release.yml @@ -0,0 +1,34 @@ +name: Release New PyPi Version + +on: + workflow_dispatch: # This event allows manual triggering + +jobs: + release: + runs-on: ubuntu-latest + + steps: + - name: Checkout Repository + uses: actions/checkout@v5 + + - name: Setup Python + uses: actions/setup-python@v6 + with: + python-version: 3.13.x + + - name: Poetry cache + uses: actions/cache@v4 + with: + path: ~/.cache/pypoetry + key: poetry-cache + + - name: Install Poetry + uses: snok/install-poetry@v1 + + - name: Install dependencies + run: poetry install --all-extras + + - name: Upload to PyPI + env: + PYPI_PASSWORD: ${{ secrets.PYPI_PASSWORD }} + run: poetry publish --build -u __token__ -p $PYPI_PASSWORD diff --git a/Jsonformer_example.ipynb b/Jsonformer_example.ipynb index d2d3f9a..8bbb4d3 100644 --- a/Jsonformer_example.ipynb +++ b/Jsonformer_example.ipynb @@ -3,8 +3,8 @@ { "cell_type": "markdown", "metadata": { - "id": "view-in-github", - "colab_type": "text" + "colab_type": "text", + "id": "view-in-github" }, "source": [ "\"Open" @@ -22,8 +22,8 @@ }, "outputs": [ { - "output_type": "stream", "name": "stdout", + "output_type": "stream", "text": [ "Looking in indexes: https://pypi.org/simple, https://us-python.pkg.dev/colab-wheels/public/simple/\n", "Requirement already satisfied: transformers in /usr/local/lib/python3.10/dist-packages (4.28.1)\n", @@ -64,7 +64,7 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": 1, "metadata": { "colab": { "base_uri": "https://localhost:8080/" @@ -74,8 +74,17 @@ }, "outputs": [ { + "name": "stderr", "output_type": "stream", + "text": [ + "/Users/calebcourier/Projects/jsonformer/.venv/lib/python3.12/site-packages/tqdm/auto.py:21: TqdmWarning: IProgress not found. Please update jupyter and ipywidgets. See https://ipywidgets.readthedocs.io/en/stable/user_install.html\n", + " from .autonotebook import tqdm as notebook_tqdm\n", + "W0915 16:52:21.949000 36819 torch/distributed/elastic/multiprocessing/redirects.py:29] NOTE: Redirects are currently not supported in Windows or MacOs.\n" + ] + }, + { "name": "stdout", + "output_type": "stream", "text": [ "Loading model and tokenizer...\n", "Loaded model and tokenizer\n" @@ -94,7 +103,7 @@ }, { "cell_type": "code", - "execution_count": 6, + "execution_count": 2, "metadata": { "colab": { "base_uri": "https://localhost:8080/" @@ -104,40 +113,47 @@ }, "outputs": [ { + "name": "stderr", "output_type": "stream", + "text": [ + "The attention mask is not set and cannot be inferred from input because pad token is same as eos token. As a consequence, you may observe unexpected behavior. Please pass your input's `attention_mask` to obtain reliable results.\n" + ] + }, + { "name": "stdout", + "output_type": "stream", "text": [ "Generating...\n", "{\n", " car: {\n", - " make: \"audi\",\n", - " model: \"model A8\",\n", - " year: 2016.0,\n", + " make: \u001b[32m\"Chevrolet\"\u001b[0m,\n", + " model: \u001b[32m\"Corvette\"\u001b[0m,\n", + " year: \u001b[32m2016.0\u001b[0m,\n", " colors: [\n", - " \"blue\"\n", + " \u001b[32m\"Red\"\u001b[0m\n", " ],\n", " features: {\n", " audio: {\n", - " brand: \"sony\",\n", - " speakers: 2.0,\n", - " hasBluetooth: True\n", + " brand: \u001b[32m\"Sony\"\u001b[0m,\n", + " speakers: \u001b[32m2.0\u001b[0m,\n", + " hasBluetooth: \u001b[32mTrue\u001b[0m\n", " },\n", " safety: {\n", - " airbags: 2.0,\n", - " parkingSensors: True,\n", - " laneAssist: True\n", + " airbags: \u001b[32m2.0\u001b[0m,\n", + " parkingSensors: \u001b[32mTrue\u001b[0m,\n", + " laneAssist: \u001b[32mTrue\u001b[0m\n", " },\n", " performance: {\n", - " engine: \"4.0\",\n", - " horsepower: 220.0,\n", - " topSpeed: 220.0\n", + " engine: \u001b[32m\"4.0\"\u001b[0m,\n", + " horsepower: \u001b[32m220.0\u001b[0m,\n", + " topSpeed: \u001b[32m220.0\u001b[0m\n", " }\n", " }\n", " },\n", " owner: {\n", - " firstName: \"John\",\n", - " lastName: \"Doe\",\n", - " age: 40.0\n", + " firstName: \u001b[32m\"John\"\u001b[0m,\n", + " lastName: \u001b[32m\"Doe\"\u001b[0m,\n", + " age: \u001b[32m40.0\u001b[0m\n", " }\n", "}\n" ] @@ -217,30 +233,40 @@ }, { "cell_type": "code", - "source": [], + "execution_count": null, "metadata": { "id": "0eA8hzFHA1jo" }, - "execution_count": null, - "outputs": [] + "outputs": [], + "source": [] } ], "metadata": { "accelerator": "GPU", "colab": { + "include_colab_link": true, "machine_shape": "hm", - "provenance": [], - "include_colab_link": true + "provenance": [] }, "gpuClass": "premium", "kernelspec": { - "display_name": "Python 3", + "display_name": ".venv", + "language": "python", "name": "python3" }, "language_info": { - "name": "python" + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.12.11" } }, "nbformat": 4, "nbformat_minor": 0 -} \ No newline at end of file +} diff --git a/README.md b/README.md index a734002..9b99d6c 100644 --- a/README.md +++ b/README.md @@ -121,3 +121,4 @@ poetry run python -m jsonformer.example ## License Jsonformer is released under the MIT License. You are free to use, modify, and distribute this software for any purpose, commercial or non-commercial, as long as the original copyright and license notice are included. + diff --git a/example.ipynb b/example.ipynb index 49520e8..b3ef327 100644 --- a/example.ipynb +++ b/example.ipynb @@ -4,13 +4,40 @@ "cell_type": "code", "execution_count": 1, "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "Name: accelerate\n", + "Version: 0.26.1\n", + "Summary: Accelerate\n", + "Home-page: https://github.com/huggingface/accelerate\n", + "Author: The HuggingFace team\n", + "Author-email: sylvain@huggingface.co\n", + "License: Apache\n", + "Location: /Users/calebcourier/Projects/jsonformer/.venv/lib/python3.12/site-packages\n", + "Requires: huggingface-hub, numpy, packaging, psutil, pyyaml, safetensors, torch\n", + "Required-by: \n" + ] + } + ], + "source": [ + "! pip show accelerate" + ] + }, + { + "cell_type": "code", + "execution_count": 2, + "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ - "/home/ubuntu/jsonformer/.venv/lib/python3.8/site-packages/tqdm/auto.py:21: TqdmWarning: IProgress not found. Please update jupyter and ipywidgets. See https://ipywidgets.readthedocs.io/en/stable/user_install.html\n", - " from .autonotebook import tqdm as notebook_tqdm\n" + "/Users/calebcourier/Projects/jsonformer/.venv/lib/python3.12/site-packages/tqdm/auto.py:21: TqdmWarning: IProgress not found. Please update jupyter and ipywidgets. See https://ipywidgets.readthedocs.io/en/stable/user_install.html\n", + " from .autonotebook import tqdm as notebook_tqdm\n", + "W0915 16:28:07.600000 92212 torch/distributed/elastic/multiprocessing/redirects.py:29] NOTE: Redirects are currently not supported in Windows or MacOs.\n" ] }, { @@ -34,9 +61,16 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": 3, "metadata": {}, "outputs": [ + { + "name": "stderr", + "output_type": "stream", + "text": [ + "The attention mask is not set and cannot be inferred from input because pad token is same as eos token. As a consequence, you may observe unexpected behavior. Please pass your input's `attention_mask` to obtain reliable results.\n" + ] + }, { "name": "stdout", "output_type": "stream", @@ -45,30 +79,43 @@ "{\n", " store: {\n", " name: \u001b[32m\"Mike's Ski Shop\"\u001b[0m,\n", - " location: \u001b[32m\"Sugarloaf\"\u001b[0m,\n", + " location: \u001b[32m\"Somewhere\"\u001b[0m,\n", " inventory: [\n", " {\n", " productId: \u001b[32m\"1234567890\"\u001b[0m,\n", - " name: \u001b[32m\"Ski Shop\"\u001b[0m,\n", - " description: \u001b[32m\"Ski Shop sells premium skis and snowboards\"\u001b[0m,\n", - " category: \u001b[32m\"Sports\"\u001b[0m,\n", + " name: \u001b[32m\"Mike's Ski Shop\"\u001b[0m,\n", + " description: \u001b[32m\"Ski Shop\"\u001b[0m,\n", + " category: \u001b[32m\"Ski Shop\"\u001b[0m,\n", + " price: \u001b[32m20.09999\u001b[0m,\n", + " inStock: \u001b[32mTrue\u001b[0m,\n", + " rating: \u001b[32m5.09999\u001b[0m,\n", + " images: [\n", + " \u001b[32m\"http://www.example.com/images/ski.png\"\u001b[0m,\n", + " \u001b[32m\"http://www.example.com/images/ski.png\"\u001b[0m\n", + " ]\n", + " },\n", + " {\n", + " productId: \u001b[32m\"9876543210\"\u001b[0m,\n", + " name: \u001b[32m\"Mike's Ski Shop\"\u001b[0m,\n", + " description: \u001b[32m\"Ski Shop\"\u001b[0m,\n", + " category: \u001b[32m\"Ski Shop\"\u001b[0m,\n", " price: \u001b[32m20.09999\u001b[0m,\n", " inStock: \u001b[32mTrue\u001b[0m,\n", " rating: \u001b[32m5.09999\u001b[0m,\n", " images: [\n", - " \u001b[32m\"https://s3.amazonaws.com/images.skisnow.com/skis\"\u001b[0m\n", + " \u001b[32m\"http://www.example.com/images/ski.png\"\u001b[0m\n", " ]\n", " },\n", " {\n", - " productId: \u001b[32m\"12345678910\"\u001b[0m,\n", - " name: \u001b[32m\"Snowboard\"\u001b[0m,\n", - " description: \u001b[32m\"Snowboard for sale\"\u001b[0m,\n", - " category: \u001b[32m\"Sports\"\u001b[0m,\n", + " productId: \u001b[32m\"9876543211\"\u001b[0m,\n", + " name: \u001b[32m\"Mike's Ski Shop\"\u001b[0m,\n", + " description: \u001b[32m\"Ski Shop\"\u001b[0m,\n", + " category: \u001b[32m\"Ski Shop\"\u001b[0m,\n", " price: \u001b[32m20.09999\u001b[0m,\n", " inStock: \u001b[32mTrue\u001b[0m,\n", " rating: \u001b[32m5.09999\u001b[0m,\n", " images: [\n", - " \u001b[32m\"https://s3.amazonaws.com/images.skisnow.com/snow\"\u001b[0m\n", + " \u001b[32m\"http://www.example.com/images/ski.png\"\u001b[0m\n", " ]\n", " }\n", " ]\n", @@ -127,7 +174,7 @@ }, { "cell_type": "code", - "execution_count": 3, + "execution_count": 4, "metadata": {}, "outputs": [ { @@ -175,7 +222,7 @@ }, { "cell_type": "code", - "execution_count": 4, + "execution_count": 5, "metadata": {}, "outputs": [ { @@ -250,7 +297,7 @@ "name": "python", "nbconvert_exporter": "python", "pygments_lexer": "ipython3", - "version": "3.8.10" + "version": "3.12.11" }, "orig_nbformat": 4 }, diff --git a/jsonformer/logits_processors.py b/jsonformer/logits_processors.py index db288d3..f29a4b9 100644 --- a/jsonformer/logits_processors.py +++ b/jsonformer/logits_processors.py @@ -1,5 +1,5 @@ from typing import List -from transformers import PreTrainedTokenizer, LogitsWarper, StoppingCriteria +from transformers import PreTrainedTokenizer, LogitsProcessor, StoppingCriteria import torch class StringStoppingCriteria(StoppingCriteria): @@ -61,7 +61,7 @@ def __call__( return False -class OutputNumbersTokens(LogitsWarper): +class OutputNumbersTokens(LogitsProcessor): def __init__(self, tokenizer: PreTrainedTokenizer, prompt: str): self.tokenizer = tokenizer self.tokenized_prompt = tokenizer(prompt, return_tensors="pt") diff --git a/poetry.lock b/poetry.lock index 4ba502a..eca2e5d 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,71 +1,73 @@ -# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand. +# This file is automatically @generated by Poetry 2.1.4 and should not be changed by hand. [[package]] name = "accelerate" -version = "0.18.0" +version = "0.26.1" description = "Accelerate" -category = "dev" optional = false -python-versions = ">=3.7.0" +python-versions = ">=3.8.0" +groups = ["dev"] files = [ - {file = "accelerate-0.18.0-py3-none-any.whl", hash = "sha256:41a84ac94407d7dcf030caf0cdadc70496594aec27ea680207bdb15b95f8a602"}, - {file = "accelerate-0.18.0.tar.gz", hash = "sha256:1dd36fd972de4a6d0cffe5e4d6d30622fd853765f773b5582cf0796deefe1016"}, + {file = "accelerate-0.26.1-py3-none-any.whl", hash = "sha256:04df826b84ac7bad8a0a8ab90e6aeacdecb1ea5a2d744d7e94f6735c29183227"}, + {file = "accelerate-0.26.1.tar.gz", hash = "sha256:bf63716b6bd9460d87da970cf4d833abb824ca0aa633be36b741e63a1b504f89"}, ] [package.dependencies] +huggingface-hub = "*" numpy = ">=1.17" packaging = ">=20.0" psutil = "*" pyyaml = "*" -torch = ">=1.4.0" +safetensors = ">=0.3.1" +torch = ">=1.10.0" [package.extras] -dev = ["black (>=23.1,<24.0)", "datasets", "deepspeed", "evaluate", 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"sha256:0dcd8baa8d62b0c1d118b399b2ddba3c4aff271d0d7a9e0d4c1681c79035bbc7"}, ] -[package.dependencies] -six = "*" - [package.extras] -test = ["astroid", "pytest"] +astroid = ["astroid (>=2,<4)"] +test = ["astroid (>=2,<4)", "pytest", "pytest-cov", "pytest-xdist"] [[package]] name = "backcall" version = "0.2.0" description = "Specifications for callback functions passed in to an API" -category = "dev" optional = false python-versions = "*" +groups = ["dev"] +markers = "python_version == \"3.8\"" files = [ {file = "backcall-0.2.0-py2.py3-none-any.whl", hash = "sha256:fbbce6a29f263178a1f7915c1940bde0ec2b2a967566fe1c65c1dfb7422bd255"}, {file = "backcall-0.2.0.tar.gz", hash = "sha256:5cbdbf27be5e7cfadb448baf0aa95508f91f2bbc6c6437cd9cd06e2a4c215e1e"}, @@ -75,9 +77,9 @@ files = [ name = "bitsandbytes" version = "0.38.1" description = "8-bit optimizers and matrix multiplication routines." -category = "dev" optional = false python-versions = "*" +groups = ["dev"] files = [ {file = 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