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1. statistics-covid statistics-covid Public

   collect data from online providers relating to the COVID19 epidemic (confirmed cases, etc.) over time and for different geographical locations

   Perl 2

2. protein-hops protein-hops Public

   Reads protein functional associations (e.g. from STRING-DB) and finds direct (0-hops) or indirect (1,2-hops) protein-links between a pair of proteins (C/C++).This work was done while working at the…

   Shell

3. neural-parser neural-parser Public

   np is a language to create neural networks and connect them together in order to create entities of neural networks. (C, bash and perl). It depends on my Neural Network Engine (see NNengine in this…

   Shell 1

4. medical-image-analysis medical-image-analysis Public

   Various programs and libraries for the analysis of MRI brain scans (UNC and ANALYZE formats). From my work at the Institute of Neurology.

   C

5. R-and-friends R-and-friends Public

   A collection of R procedures bundled inside a bash script. The bash script can be run from the command line and provides a very convenient way to execute tedious R procedures with command-line para…

   Shell

6. perl-inline-cuda perl-inline-cuda Public

   Provides a preliminary Perl Inline::CUDA module until migration to CPAN. Inline::CUDA allows inlining in Perl C-or-C++-code with NVIDIA's CUDA extensions.

   Perl 2 2