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plot.manhattan assumes locus is default_reference #6575

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tpoterba opened this issue Jul 8, 2019 · 0 comments

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commented Jul 8, 2019

contig_ticks = hail.eval([hail.locus(contig, int(ref.lengths[contig]/2)).global_position() for contig in observed_contigs])

@tpoterba tpoterba added the bug label Jul 8, 2019

@tpoterba tpoterba self-assigned this Jul 8, 2019

tpoterba added a commit to tpoterba/hail that referenced this issue Jul 9, 2019

danking added a commit that referenced this issue Jul 10, 2019

[hail][bugfix] Fix reference genome compatibility in plot.manhattan (#…
…6583)

* [hail][bugfix] Fix reference genome compatibility in plot.manhattan

Fixes #6575

* bump!
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