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Fix the globals #4778

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merged 1 commit into from Nov 14, 2018

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tpoterba commented Nov 14, 2018

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@danking danking merged commit 772a861 into hail-is:master Nov 14, 2018

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@tpoterba tpoterba deleted the tpoterba:fix-the-globals branch Nov 14, 2018

danking added a commit that referenced this pull request Nov 16, 2018

site: update cloudtools to v3 in latest hash (#4771)
Iterator[RegionValue] wrappers for passing to/from c++ (#4729)

* working iterators in both directions?

* store region inside iterator class

* rewrite in c++ iterator style

* fix rebase

* make thinner iterator wrapper for Reader object

* rewrite java iterators, too

* const all the things

* addressed comments (iterator class as member of wrapper class)

* fix

* fix rebase

Fix argument evaluation pattern of ApplyIR node. (#4769)

* Fix argument evaluation pattern of ApplyIR node.

This should be a big performance boost.

* Fix emitter

* remove println

* Remove tuple item registry

Fix aggregation_method() used in plotting (#4777)

The check for col fields was always returning false, sending col
fields to aggregate_entries

Fix the globals (#4778)

More informative assertion in MatrixNativeReader (#4749)

Added experimental function for haplotype counts with EM (#4779)

Add TableMultiWayZipJoin (take 2) (#4720)

* Multi zip join for OrderedRVIterator, ContextRDD

* Add TableMultiWayZipJoin IR node

* Add multiWayZipJoin to python

* Style fixes

* Add simple global values tests

* Add memoization test

* Remove redundant RVDType construction

* Add type checking and error messages to python

* Add rebuild case for TableMultiWayZipJoin

* Update for upstream changes

* Fix rebase issues

* Use lookup for upcast rather than unify

* Add rebuild test (#1)

Get rid of some nasty vectors (#4783)

wip

wip

add pylintrc

add setup

missing files

add minikube setup

fixes

fixes

fixes

fix

wip

test local starts a server to test

restructure folders

refactor server

fixes

works

fixes

add test

danking added a commit that referenced this pull request Nov 16, 2018

site: update cloudtools to v3 in latest hash (#4771)
Iterator[RegionValue] wrappers for passing to/from c++ (#4729)

* working iterators in both directions?

* store region inside iterator class

* rewrite in c++ iterator style

* fix rebase

* make thinner iterator wrapper for Reader object

* rewrite java iterators, too

* const all the things

* addressed comments (iterator class as member of wrapper class)

* fix

* fix rebase

Fix argument evaluation pattern of ApplyIR node. (#4769)

* Fix argument evaluation pattern of ApplyIR node.

This should be a big performance boost.

* Fix emitter

* remove println

* Remove tuple item registry

Fix aggregation_method() used in plotting (#4777)

The check for col fields was always returning false, sending col
fields to aggregate_entries

Fix the globals (#4778)

More informative assertion in MatrixNativeReader (#4749)

Added experimental function for haplotype counts with EM (#4779)

Add TableMultiWayZipJoin (take 2) (#4720)

* Multi zip join for OrderedRVIterator, ContextRDD

* Add TableMultiWayZipJoin IR node

* Add multiWayZipJoin to python

* Style fixes

* Add simple global values tests

* Add memoization test

* Remove redundant RVDType construction

* Add type checking and error messages to python

* Add rebuild case for TableMultiWayZipJoin

* Update for upstream changes

* Fix rebase issues

* Use lookup for upcast rather than unify

* Add rebuild test (#1)

Get rid of some nasty vectors (#4783)

wip

wip

add pylintrc

add setup

missing files

add minikube setup

fixes

fixes

fixes

fix

wip

test local starts a server to test

restructure folders

refactor server

fixes

works

fixes

add test

danking added a commit that referenced this pull request Nov 16, 2018

site: update cloudtools to v3 in latest hash (#4771)
Iterator[RegionValue] wrappers for passing to/from c++ (#4729)

* working iterators in both directions?

* store region inside iterator class

* rewrite in c++ iterator style

* fix rebase

* make thinner iterator wrapper for Reader object

* rewrite java iterators, too

* const all the things

* addressed comments (iterator class as member of wrapper class)

* fix

* fix rebase

Fix argument evaluation pattern of ApplyIR node. (#4769)

* Fix argument evaluation pattern of ApplyIR node.

This should be a big performance boost.

* Fix emitter

* remove println

* Remove tuple item registry

Fix aggregation_method() used in plotting (#4777)

The check for col fields was always returning false, sending col
fields to aggregate_entries

Fix the globals (#4778)

More informative assertion in MatrixNativeReader (#4749)

Added experimental function for haplotype counts with EM (#4779)

Add TableMultiWayZipJoin (take 2) (#4720)

* Multi zip join for OrderedRVIterator, ContextRDD

* Add TableMultiWayZipJoin IR node

* Add multiWayZipJoin to python

* Style fixes

* Add simple global values tests

* Add memoization test

* Remove redundant RVDType construction

* Add type checking and error messages to python

* Add rebuild case for TableMultiWayZipJoin

* Update for upstream changes

* Fix rebase issues

* Use lookup for upcast rather than unify

* Add rebuild test (#1)

Get rid of some nasty vectors (#4783)

wip

wip

add pylintrc

add setup

missing files

add minikube setup

fixes

fixes

fixes

fix

wip

test local starts a server to test

restructure folders

refactor server

fixes

works

fixes

add test

danking added a commit that referenced this pull request Nov 16, 2018

site: update cloudtools to v3 in latest hash (#4771)
Iterator[RegionValue] wrappers for passing to/from c++ (#4729)

* working iterators in both directions?

* store region inside iterator class

* rewrite in c++ iterator style

* fix rebase

* make thinner iterator wrapper for Reader object

* rewrite java iterators, too

* const all the things

* addressed comments (iterator class as member of wrapper class)

* fix

* fix rebase

Fix argument evaluation pattern of ApplyIR node. (#4769)

* Fix argument evaluation pattern of ApplyIR node.

This should be a big performance boost.

* Fix emitter

* remove println

* Remove tuple item registry

Fix aggregation_method() used in plotting (#4777)

The check for col fields was always returning false, sending col
fields to aggregate_entries

Fix the globals (#4778)

More informative assertion in MatrixNativeReader (#4749)

Added experimental function for haplotype counts with EM (#4779)

Add TableMultiWayZipJoin (take 2) (#4720)

* Multi zip join for OrderedRVIterator, ContextRDD

* Add TableMultiWayZipJoin IR node

* Add multiWayZipJoin to python

* Style fixes

* Add simple global values tests

* Add memoization test

* Remove redundant RVDType construction

* Add type checking and error messages to python

* Add rebuild case for TableMultiWayZipJoin

* Update for upstream changes

* Fix rebase issues

* Use lookup for upcast rather than unify

* Add rebuild test (#1)

Get rid of some nasty vectors (#4783)

wip

wip

add pylintrc

add setup

missing files

add minikube setup

fixes

fixes

fixes

fix

wip

test local starts a server to test

restructure folders

refactor server

fixes

works

fixes

add test

danking added a commit that referenced this pull request Nov 16, 2018

site: update cloudtools to v3 in latest hash (#4771)
Iterator[RegionValue] wrappers for passing to/from c++ (#4729)

* working iterators in both directions?

* store region inside iterator class

* rewrite in c++ iterator style

* fix rebase

* make thinner iterator wrapper for Reader object

* rewrite java iterators, too

* const all the things

* addressed comments (iterator class as member of wrapper class)

* fix

* fix rebase

Fix argument evaluation pattern of ApplyIR node. (#4769)

* Fix argument evaluation pattern of ApplyIR node.

This should be a big performance boost.

* Fix emitter

* remove println

* Remove tuple item registry

Fix aggregation_method() used in plotting (#4777)

The check for col fields was always returning false, sending col
fields to aggregate_entries

Fix the globals (#4778)

More informative assertion in MatrixNativeReader (#4749)

Added experimental function for haplotype counts with EM (#4779)

Add TableMultiWayZipJoin (take 2) (#4720)

* Multi zip join for OrderedRVIterator, ContextRDD

* Add TableMultiWayZipJoin IR node

* Add multiWayZipJoin to python

* Style fixes

* Add simple global values tests

* Add memoization test

* Remove redundant RVDType construction

* Add type checking and error messages to python

* Add rebuild case for TableMultiWayZipJoin

* Update for upstream changes

* Fix rebase issues

* Use lookup for upcast rather than unify

* Add rebuild test (#1)

Get rid of some nasty vectors (#4783)

wip

wip

add pylintrc

add setup

missing files

add minikube setup

fixes

fixes

fixes

fix

wip

test local starts a server to test

restructure folders

refactor server

fixes

works

fixes

add test

danking added a commit that referenced this pull request Nov 16, 2018

site: update cloudtools to v3 in latest hash (#4771)
Iterator[RegionValue] wrappers for passing to/from c++ (#4729)

* working iterators in both directions?

* store region inside iterator class

* rewrite in c++ iterator style

* fix rebase

* make thinner iterator wrapper for Reader object

* rewrite java iterators, too

* const all the things

* addressed comments (iterator class as member of wrapper class)

* fix

* fix rebase

Fix argument evaluation pattern of ApplyIR node. (#4769)

* Fix argument evaluation pattern of ApplyIR node.

This should be a big performance boost.

* Fix emitter

* remove println

* Remove tuple item registry

Fix aggregation_method() used in plotting (#4777)

The check for col fields was always returning false, sending col
fields to aggregate_entries

Fix the globals (#4778)

More informative assertion in MatrixNativeReader (#4749)

Added experimental function for haplotype counts with EM (#4779)

Add TableMultiWayZipJoin (take 2) (#4720)

* Multi zip join for OrderedRVIterator, ContextRDD

* Add TableMultiWayZipJoin IR node

* Add multiWayZipJoin to python

* Style fixes

* Add simple global values tests

* Add memoization test

* Remove redundant RVDType construction

* Add type checking and error messages to python

* Add rebuild case for TableMultiWayZipJoin

* Update for upstream changes

* Fix rebase issues

* Use lookup for upcast rather than unify

* Add rebuild test (#1)

Get rid of some nasty vectors (#4783)

wip

wip

add pylintrc

add setup

missing files

add minikube setup

fixes

fixes

fixes

fix

wip

test local starts a server to test

restructure folders

refactor server

fixes

works

fixes

add test

danking added a commit that referenced this pull request Nov 16, 2018

site: update cloudtools to v3 in latest hash (#4771)
Iterator[RegionValue] wrappers for passing to/from c++ (#4729)

* working iterators in both directions?

* store region inside iterator class

* rewrite in c++ iterator style

* fix rebase

* make thinner iterator wrapper for Reader object

* rewrite java iterators, too

* const all the things

* addressed comments (iterator class as member of wrapper class)

* fix

* fix rebase

Fix argument evaluation pattern of ApplyIR node. (#4769)

* Fix argument evaluation pattern of ApplyIR node.

This should be a big performance boost.

* Fix emitter

* remove println

* Remove tuple item registry

Fix aggregation_method() used in plotting (#4777)

The check for col fields was always returning false, sending col
fields to aggregate_entries

Fix the globals (#4778)

More informative assertion in MatrixNativeReader (#4749)

Added experimental function for haplotype counts with EM (#4779)

Add TableMultiWayZipJoin (take 2) (#4720)

* Multi zip join for OrderedRVIterator, ContextRDD

* Add TableMultiWayZipJoin IR node

* Add multiWayZipJoin to python

* Style fixes

* Add simple global values tests

* Add memoization test

* Remove redundant RVDType construction

* Add type checking and error messages to python

* Add rebuild case for TableMultiWayZipJoin

* Update for upstream changes

* Fix rebase issues

* Use lookup for upcast rather than unify

* Add rebuild test (#1)

Get rid of some nasty vectors (#4783)

wip

wip

add pylintrc

add setup

missing files

add minikube setup

fixes

fixes

fixes

fix

wip

test local starts a server to test

restructure folders

refactor server

fixes

works

fixes

add test
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