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Add force_bgz and force arguments to import_gtf #7389

merged 1 commit into from Oct 26, 2019


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@nawatts nawatts commented Oct 25, 2019

Currently, there is no way to directly import a GTF file with a ".gz" extension. The options are either rename it to ".bgz" if it is block compressed or decompress it outside of Hail if it is not. It would be nice if import_gtf supported the same force_bgz and force arguments as import_table.

@danking danking merged commit 1a636ed into hail-is:master Oct 26, 2019
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@nawatts nawatts deleted the import-gtf-force-args branch Oct 29, 2019
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3 participants