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The html coverage reporter now displays pre-transpiled code when code is transpiled. Additionally, the coverage calculation excludes comments and blank lines. As a result, the coverage calculation is more accurate as it only considers actual code.
The coverage percentages may be lower as comments and blank lines are no longer counted toward source lines of code. Further, the html reporter now shows pre-transpiled code instead of transpiled code (when transpilation occurs).
Adjust any coverage threshold percentages in your test run scripts after running version v13.0.0 with coverage enabled.