Error while running drugz

[ghoshal]

Hi,

I am getting the following error while running drugz. Do you have any idea why it might be happening?

Traceback (most recent call last):
File "/Users/bibaswan/Documents/programs/drugz/drugz.py", line 242, in
main()
File "/Users/bibaswan/Documents/programs/drugz/drugz.py", line 238, in main
args.fc_outfile, remove_genes, args.pseudocount, args.minObs, args.half_window_size, args.index_column, not args.quiet)
File "/Users/bibaswan/Documents/programs/drugz/drugz.py", line 113, in drugz
if (ebstd >= fc[eb_std_samplid][i-1]):
File "/Users/bibaswan/anaconda/lib/python3.5/site-packages/pandas/core/series.py", line 623, in getitem
result = self.index.get_value(self, key)
File "/Users/bibaswan/anaconda/lib/python3.5/site-packages/pandas/core/indexes/base.py", line 2560, in get_value
tz=getattr(series.dtype, 'tz', None))
File "pandas/_libs/index.pyx", line 83, in pandas._libs.index.IndexEngine.get_value
File "pandas/_libs/index.pyx", line 91, in pandas._libs.index.IndexEngine.get_value
File "pandas/_libs/index.pyx", line 139, in pandas._libs.index.IndexEngine.get_loc
File "pandas/_libs/hashtable_class_helper.pxi", line 811, in pandas._libs.hashtable.Int64HashTable.get_item
File "pandas/_libs/hashtable_class_helper.pxi", line 817, in pandas._libs.hashtable.Int64HashTable.get_item
KeyError: 499

Thanks,

Bibaswan

[mcolic]

Hi Bibaswan,

I can take a look of it. Do you mind sharing your input file (mcolic@mdanderson.org), and I ll check it.

Best,
Medina