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@hatch-lab

hatch-lab

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  1. mnfinder mnfinder Public

    MN segmentation neural net

    Jupyter Notebook

  2. mammel_et_al_2021 mammel_et_al_2021 Public

    MATLAB 1

  3. LaminHoles LaminHoles Public

    Forked from FredHutch/LaminHoles

    Quantification of nuclear lamina gaps in the nuclear envelope

    MATLAB

  4. RFP_cyto_NER_analysis RFP_cyto_NER_analysis Public

    Code used to analyze screen images in Gunn et al., Sci Reports, 2024

    R

Repositories

Showing 10 of 12 repositories
  • panel-maker Public

    Tool for generating image panels

    hatch-lab/panel-maker’s past year of commit activity
    Python 0 GPL-3.0 0 0 2 Updated Sep 13, 2024
  • mnfinder Public

    MN segmentation neural net

    hatch-lab/mnfinder’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Sep 12, 2024
  • RFP_cyto_NER_analysis Public

    Code used to analyze screen images in Gunn et al., Sci Reports, 2024

    hatch-lab/RFP_cyto_NER_analysis’s past year of commit activity
    R 0 0 0 0 Updated Mar 13, 2024
  • LaminHoles Public Forked from FredHutch/LaminHoles

    Quantification of nuclear lamina gaps in the nuclear envelope

    hatch-lab/LaminHoles’s past year of commit activity
    MATLAB 0 GPL-3.0 1 0 0 Updated Mar 12, 2024
  • CellSeg Public Forked from michaellee1/CellSeg

    Updated for running under TF 2

    hatch-lab/CellSeg’s past year of commit activity
    Jupyter Notebook 0 MIT 25 0 0 Updated Jun 6, 2023
  • flat-field-correction Public
    hatch-lab/flat-field-correction’s past year of commit activity
    Python 0 0 0 0 Updated Mar 31, 2023
  • ne-rupture Public

    Nuclear envelope rupture/repair analysis tool

    hatch-lab/ne-rupture’s past year of commit activity
    Python 0 0 0 2 Updated Mar 9, 2023
  • git-demo Public

    Demo

    hatch-lab/git-demo’s past year of commit activity
    0 0 0 0 Updated Mar 3, 2023
  • CellProfiler Public Forked from CellProfiler/CellProfiler

    An open-source application for biological image analysis

    hatch-lab/CellProfiler’s past year of commit activity
    Python 0 382 0 0 Updated Feb 1, 2022
  • mammel_et_al_2021 Public
    hatch-lab/mammel_et_al_2021’s past year of commit activity
    MATLAB 0 1 0 0 Updated Oct 20, 2021
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