Alexander Heimel edited this page May 8, 2015 · 24 revisions

##InVivoTools Manual Wiki

InVivoTools is a system for journaling, retrieving, analyzing and plotting experimental data.

This manual can be found at https://github.com/heimel/InVivoTools/wiki

Chapter 1 describes the installation of InVivoTools.

Chapter 2 covers the use of database control gui and the databases that are part of InVivoTools.

Chapter 3 explains how to made figure using Graph_db.

Chapter 4 gives information about the functions and software internals for developing and adding to InVivoTools.

Showing visual stimuli with the NewStim package (forked from the Van Hooser lab tools) that is included with InVivoTools is covered in http://csflab.nin.knaw.nl/protocols/manual-newstim-and-runexperiment

For more information on microscopic image analysis, see http://csflab.nin.knaw.nl/protocols/puncta-analysis-using-matlab

Maintainer: Alexander Heimel

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