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GEM
remote: http://rubygems.org/
specs:
activemodel (3.2.3)
activesupport (= 3.2.3)
builder (~> 3.0.0)
activerecord (3.2.3)
activemodel (= 3.2.3)
activesupport (= 3.2.3)
arel (~> 3.0.2)
tzinfo (~> 0.3.29)
activerecord-jdbc-adapter (1.2.2)
activerecord-jdbcsqlite3-adapter (1.2.2)
activerecord-jdbc-adapter (~> 1.2.2)
jdbc-sqlite3 (~> 3.7.2)
activesupport (3.2.3)
i18n (~> 0.6)
multi_json (~> 1.0)
arel (3.0.2)
bio (1.4.2)
bio-blastxmlparser (1.0.1)
bio-logger (>= 1.0.0)
nokogiri (>= 1.5.0)
bio-logger (1.0.1)
log4r (>= 1.1.9)
bio-samtools (0.5.3)
bio (>= 1.4.2)
ffi
builder (3.0.0)
daemons (1.1.8)
diff-lcs (1.1.3)
ffi (1.0.11)
ffi (1.0.11-java)
git (1.2.5)
i18n (0.6.0)
jdbc-sqlite3 (3.7.2)
jeweler (1.8.3)
bundler (~> 1.0)
git (>= 1.2.5)
rake
rdoc
json (1.7.3)
json (1.7.3-java)
log4r (1.1.10)
multi_json (1.3.6)
nokogiri (1.5.2)
nokogiri (1.5.2-java)
parallel (0.5.16)
progressbar (0.11.0)
rake (0.9.2.2)
rcov (0.9.11)
rcov (0.9.11-java)
rdoc (3.12)
json (~> 1.4)
rspec (2.10.0)
rspec-core (~> 2.10.0)
rspec-expectations (~> 2.10.0)
rspec-mocks (~> 2.10.0)
rspec-core (2.10.1)
rspec-expectations (2.10.0)
diff-lcs (~> 1.1.3)
rspec-mocks (2.10.1)
ruby-ensembl-api (1.0.1)
activerecord
bio (>= 1)
rubyvis (0.5.1)
shoulda (3.0.1)
shoulda-context (~> 1.0.0)
shoulda-matchers (~> 1.0.0)
shoulda-context (1.0.0)
shoulda-matchers (1.0.0)
sqlite3 (1.3.6)
thor (0.14.6)
tzinfo (0.3.33)
PLATFORMS
java
ruby
DEPENDENCIES
activerecord (>= 3.0.5)
activerecord-jdbcsqlite3-adapter
bio (>= 1.4.2)
bio-blastxmlparser
bio-samtools (>= 0.3.2)
bundler (~> 1.1.0)
daemons (>= 1.1.0)
ffi (>= 1.0.6)
jdbc-sqlite3
jeweler (~> 1.8.3)
json
parallel
progressbar (>= 0.9.0)
rake (= 0.9.2.2)
rcov (~> 0.9.11)
rspec (>= 2.5.0)
ruby-ensembl-api (>= 1.0.1)
rubyvis (>= 0.5.0)
shoulda
sqlite3
thor (= 0.14.6)
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