Skip to content
A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments
R C++
Branch: master
Clone or download
wikiselev Merge pull request #90 from nh3/transfs
Copy transformations to @reducedDims when possible
Latest commit eaae33b Apr 5, 2019
Permalink
Type Name Latest commit message Commit time
Failed to load latest commit information.
.github/ISSUE_TEMPLATE Update issue templates Jan 22, 2019
R
data Integrate SingleCellExperiment class Oct 4, 2017
inst final update before release; `sc3` slot is now stored in the `metadat… Oct 19, 2017
man Pass k_estimate results if ks is NULL; fixes #67 Apr 19, 2018
src system update Oct 4, 2017
vignettes add defaults description for n_cores Mar 9, 2018
.Rbuildignore add travis-CI Mar 25, 2016
DESCRIPTION bump version number May 9, 2018
LICENSE Create LICENSE Jan 23, 2019
NAMESPACE convert all rowData and colData to DataFrame class Jan 8, 2018
README.md update the logo Jul 24, 2017

README.md

Q: What is this?
A: SC3 is a tool for the unsupervised clustering of cells from single cell RNA-Seq experiments. SC3 main page is on BioConductor.

Q: How to install/run SC3?
A: Please follow the SC3 manual from its BioConductor page.

If you would like to install the latest development version of SC3 please install it from the GitHub repository:

install.packages("devtools")
devtools::install_github("hemberg-lab/SC3")

Q: Where can I report bugs, comments, issues or suggestions?
A: Please use this page.

Q: Where can I ask questions about SC3?
A: Please use this page.

Q: Is SC3 published?
A: Yes, SC3 is published in Nature Methods.

Q: What is SC3 licence?
A: GPL-3

You can’t perform that action at this time.