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Python package for matrix storage and operations on hetnets
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hetmatpy: a Python 3 package for matrix operations of hetnets

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This codebase enables identifying the relevant network connections between a set of query nodes. The method is designed to operate on hetnets (networks with multiple node or relationship types).

This project is still under development. Use with caution.


Install via pip from GitHub using:

pip install git+

For local development, run the following inside the development environment:

pip install --editable .


This work is supported through a research collaboration with Pfizer Worldwide Research and Development. This work is funded in part by the Gordon and Betty Moore Foundation’s Data-Driven Discovery Initiative through Grants GBMF4552 to Casey Greene and GBMF4560 to Blair Sullivan.

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