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@biojava @OBF @amplab @nrnb @bigdatagenomics @BD2KGenomics @piccolo2d
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  1. bigdatagenomics/adam bigdatagenomics/adam Public

    ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

    Scala 967 304

  2. bigdatagenomics/cannoli bigdatagenomics/cannoli Public

    Distributed execution of bioinformatics tools on Apache Spark. Apache 2 licensed.

    Scala 38 17

  3. bigdatagenomics/bdg-formats bigdatagenomics/bdg-formats Public

    Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.

    Shell 38 36

  4. disq-bio/disq disq-bio/disq Public

    A library for manipulating bioinformatics sequencing formats in Apache Spark

    Java 31 11

  5. dishevelled-bio dishevelled-bio Public bio

    Java 6

  6. lick lick Public

    LiCK, Library for ChucK

    ChucK 145 21