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Hello, world!

My name is Himel Mallick. I am a computational biologist currently working at Merck Research Laboratories. I am an extended lab member of the bioBakery software development team at the Harvard Chan School and the Broad Institute.

As background, I am a Julia enthusiast, a Python explorer, and an R developer. Mostly, I develop computational methods and open-source software for the analysis of high-dimensional genomics data with a particular emphasis on microbiome multi-omics and multimodal single-cell RNA sequencing data.

For more information, please visit my website at and feel free to get in touch on Twitter or on LinkedIn.

Blog & Writing

I am an occasional blog writer and you can find my blog articles on my website at I am also engaged in publishing papers in peer-reviewed journals. A complete list of my publications can be found on Google Scholar.

📈 GitHub Stats

Himel's github stats

Notable Software

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  1. A curated list of early career data science student paper awards and travel grants.

  2. AMAZonn Public

    A Multicollinearity-adjusted Adaptive LASSO for Zero-inflated Count Regression

    R 5 1

  3. Gooogle Public

    Group Regularization for Zero-inflated Count Regression Models

    R 3 1

  4. Bayesian Reciprocal Regularization

    R 4

  5. UBR Public

    Unified Bayesian Regularization via Scale Mixture of Uniform Distributions

    R 1

  6. Large-scale Benchmarking of Single-cell Differential Expression Analysis Methods

    R 1

389 contributions in the last year

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Contribution activity

October 2021

himelmallick has no activity yet for this period.

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