From 0d608a0df5929615b321f3c7e5b5948e91f2fa33 Mon Sep 17 00:00:00 2001
From: Kamil Slowikowski <kslowikowski@gmail.com>
Date: Sat, 3 Jun 2017 16:17:28 -0400
Subject: [PATCH] use AnnotationDbi::select instead of select

Other packages also define a function called select

dplyr
MASS
AnnotationDbi

It's necessary to specify the correct function.
---
 R/functions.R | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/R/functions.R b/R/functions.R
index cde0066..e8d7043 100644
--- a/R/functions.R
+++ b/R/functions.R
@@ -93,7 +93,7 @@ clean.gos <- function(go.env, min.size = 5, max.size = 5000, annot = FALSE) {
   go.env <- go.env[size > min.size & size < max.size]
   # If we have GO.db installed, then add the term to each GO code.
   if (annot && "GO.db" %in% installed.packages()[,1]) {
-    desc <- select(
+    desc <- AnnotationDbi::select(
       GO.db,
       keys = names(go.env),
       columns = c("TERM"),