This repository contains additional information for the paper:
Gutierrez, J. I., Brittingham, G. P., Karadeniz, Y. B., Tran, K. D., Dutta, A., Holehouse, A. S., Peterson, C. L., & Holt, L. J. (2022). SWI/SNF senses carbon starvation with a pH-sensitive low complexity sequence. eLife, 11. https://doi.org/10.7554/eLife.70344
All input and output data generate from the bioinformatics analysis are stored here
Input sequence and keyfiles used to run all-atom simulations are provided here
Sequence analysis was performed by the package sparrow, which will shortly be available for use and download from https://github.com/holehouse-lab/sparrow.
Sequence curation was performed using the package SHEPHARD, which is available now from https://github.com/holehouse-lab/shephard