A list of my scientific publication
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2017

  • How to optimize the precision of allele and haplotype frequency estimates using pooled-sequencing data. Nicolas O. Rode, Yan Holtz, Karine Loridon, Sylvain Santoni, Joëlle Ronfort, Laurène Gay. Molecular Ecology resources. Web

  • Evolutionary forces affecting synonymous variations in plant genomes. Y. Clément, G. Sarah, Y. Holtz, F. Homa, …, J. David, S. Glémin. PLOS Genetics. Web

  • Epistatic determinism of durum wheat to the wheat spindle streak mosaic virus (WSSMV). Y. Holtz, M. Bonnefoy, V. Viader, M. Ardisson, N. Rode, G. Poux, P. Roumet, V. Marie-Jeanne, V. Ranwez, D. Gouache, J. David . Theor Appl Genet. (2017) PDF, code, Web

  • The Genetic Map Comparator: A User-Friendly Application to Display and Compare Genetic Maps. Y. Holtz, J. David, V. Ranwez. Bioinformatics. Web, PDF, Online Tool


2016

  • Genotyping by Sequencing using specific allelic capture to build a high-density genetic map of Durum Wheat. Y. Holtz, M. Ardisson, V. Ranwez, A. Besnard, P. Leroy, G. Poux, P. Roumet, V. Viader, S. Santoni, J. David . PLoS ONE. PDF, Web

2015

  • Phénotypages de la résistance du blé dur au Wheat Spindle Streak Mosaic Virus. V. Viader, Y. Holtz, S. Santoni, V. Marie-Jeanne, J. David. Cahier des techniques de l’INRA Web

2014

  • Genotyping by sequencing transcriptomes in an evolutionary pre-breeding durum wheat population. Jacques David, Yan Holtz, Vincent Ranwez, Sylvain Santoni, Gautier Sarah, Morgane Ardisson, Gérard Poux Fréderic Choulet, Clémence Genthon, Pierre Roumet, Muriel Tavaud-Pirra. Molecular Breeding Web, PDF

2012 - 2013

  • Disentangling homeologous contigs in allo-tetraploid assembly: application to durum wheat. V Ranwez, Y Holtz, G Sarah, M Ardisson, S Santoni, S Glémin, M Tavaud-Pirra, J. David . BMC Bioinformatics. Web, PDF

  • New insights for estimating the genetic value of segregating apple progenies for irregular bearing during the first years of tree production. Jean-Baptiste Durand1, Baptiste Guitton, Jean Peyhardi, Yan Holtz, Yann Guédon, Catherine Trottier and Evelyne Costes. J. Exp. Bot. Web, PDF

  • Étude du déterminisme génétique de l’alternance du pommier. Yan Holtz. Mémoire de fin d’étude (2012). PDF

  • Synthesis of New Interspecific Triploid Hybrids from Natural AB Germplasm in Banana (Musa sp.). Jenny,C., Holtz Y., Horry J.P.and Bakry F. ISHS Acta Horticulturae. Web