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Computation of theoretical migration paths of uniparental lineages based on geolocated, dated samples and a tree with date estimates
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PhyloGeographerCommon
MigrationCalc2019.py
README

README

PHYLOGEOGRAPHER

Computation of theoretical migration paths of uniparental lineages based on geolocated, dated samples and a tree with date estimates

The current version is not usable by others, it contains hard-coded references to my data sources and file structure.

In the future I plan to move all migration calculation logic to a package usable by other researchers.

Description of how the algorithm computes the migration - https://phylogeographer.com/methodology/
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