an R package for predicting plant biomass accumulation based on image-derived parameters
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data
README.md
models.R
my.code.R
pca.plot.R
run.R

README.md

HTPmod

an R package for predicting plant biomass accumulation based on image-derived parameters

How to start

Rscript run.R

Distribution

The files included in this distribution are as follows:

  • README
  • models.R: prdictive models
  • data: directory containing test data
  • run.R: script used to analyze data and generate figures
  • pca.plot.R: use to generate PCA plots
  • my.code.R: R functions required to run "run.R"

Reference:

Predicting plant biomass accumulation from image-derived parameters. Dijun Chen, Rongli Shi, Jean-Michel Pape, Kerstin Neumann, Daniel Arend, Andreas Graner, Ming Chen, and Christian Klukas. doi: https://doi.org/10.1093/gigascience/giy001