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A Pan-Fungal Genomes Database
Perl Shell
branch: master

modifications of Sucheta's script but it should be fixed -- the scrip…

…t in git(hyphaltip) -> genome-scripts/data_format/gtf2gff3_3level.pl actually does it all already in a more generic format, it just needed a few tweaks
latest commit e7b68f2f1b
@hyphaltip authored

README

Set up your enviro:

mkdir ~/perllib ; cd ~/perllib
perl -Mlocal::lib=./ ; eval $(perl -Mlocal::lib=./)





lib/
lib/FungiDB
lib/FungiDB/Source - *.pm for each source
    Sources describe how to fetch data from them.
lib/FungiDB/Organism - *pm for each organism
    Organisms know their source and any special attributes about their data.
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